| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is plsC [H]
Identifier: 119776271
GI number: 119776271
Start: 3726934
End: 3727671
Strand: Reverse
Name: plsC [H]
Synonym: Sama_3139
Alternate gene names: 119776271
Gene position: 3727671-3726934 (Counterclockwise)
Preceding gene: 119776272
Following gene: 119776270
Centisome position: 86.57
GC content: 55.83
Gene sequence:
>738_bases GTGCTGTTAATCGTCAGATCCTTGCTGTTGGCTATATTGCTGCTGATGGCATTCATCGTGGGTTCCATTGCCTGTTTGTT GCGCCCAAGGCACCGTGACAATGTACATATGTTCGCCAAATGGTTCTCTGCCGTCGCGCCGGTATTGGGAATTAAGGTGA TAGTGCGTCGTCCCCAGGCCGCCAGCAGTGAGCCTTGCGTCTACCTTGCCAACCATCAAAACAACTTTGACATGTTCACC CATACCGCTGCCGTGCCTAAAGGTACTGTGAGCCTGGGGAAAAAGAGCATCGCCTGGATGCCATTCTTCGGCCAAATATA CTGGTTGTCGGGCAATATCCTTATTGATCGTAAAAACCGTAACCGCGCCTTTGAGACCATGGCCAACACCGCCAGAAAAA TCAAAGATAAGTGCCTGTCGGTGTGGATTTTCCCCGAAGGTACCCGCAGTCGTGGCCGGGGGCTCCTGCCATTCAAGGCC GGGGCTTTCCACACGGCGATCGCCGCCGGTGTGCCCATGGTGCCAGTGCTGGCCTCCAACCAGTGCCACATCAAACTCAA TCGCTGGAATAATGGCGTGGTGATCATCGAGCAGATGGAACCCTTTGAGACCAAGGGGCTGGACAAGAGTCAGGTCAAGG AACTGTCTGAGCGCATCCACGCCGCCATGTCGGCCAGGCTTGAGCAGCTTAACCGCGAGGCCGACGCCCTGATGGGCCGA GCCCGTCTGGCCAACTGA
Upstream 100 bases:
>100_bases TAATGATTAATTAATAAATCAGCGCACACGTGTAAACAAAATATTGTTCCCGTCATACTCTGTCGTTATACTGCGCAGGA GTTTTTACCGGGAGTATGTC
Downstream 100 bases:
>100_bases CGCCTTTTTTAATCTCTGTTATACTGCGCCCTGATTGCGCCTCCCGTGGTGGGCAGGCGCTTGCTTTGTTTATTGGAGTC AGCCCATGTCTATTGAGCGC
Product: 1-acylglycerol-3-phosphate O-acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLLIVRSLLLAILLLMAFIVGSIACLLRPRHRDNVHMFAKWFSAVAPVLGIKVIVRRPQAASSEPCVYLANHQNNFDMFT HTAAVPKGTVSLGKKSIAWMPFFGQIYWLSGNILIDRKNRNRAFETMANTARKIKDKCLSVWIFPEGTRSRGRGLLPFKA GAFHTAIAAGVPMVPVLASNQCHIKLNRWNNGVVIIEQMEPFETKGLDKSQVKELSERIHAAMSARLEQLNREADALMGR ARLAN
Sequences:
>Translated_245_residues MLLIVRSLLLAILLLMAFIVGSIACLLRPRHRDNVHMFAKWFSAVAPVLGIKVIVRRPQAASSEPCVYLANHQNNFDMFT HTAAVPKGTVSLGKKSIAWMPFFGQIYWLSGNILIDRKNRNRAFETMANTARKIKDKCLSVWIFPEGTRSRGRGLLPFKA GAFHTAIAAGVPMVPVLASNQCHIKLNRWNNGVVIIEQMEPFETKGLDKSQVKELSERIHAAMSARLEQLNREADALMGR ARLAN >Mature_245_residues MLLIVRSLLLAILLLMAFIVGSIACLLRPRHRDNVHMFAKWFSAVAPVLGIKVIVRRPQAASSEPCVYLANHQNNFDMFT HTAAVPKGTVSLGKKSIAWMPFFGQIYWLSGNILIDRKNRNRAFETMANTARKIKDKCLSVWIFPEGTRSRGRGLLPFKA GAFHTAIAAGVPMVPVLASNQCHIKLNRWNNGVVIIEQMEPFETKGLDKSQVKELSERIHAAMSARLEQLNREADALMGR ARLAN
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position. This enzyme can utilize either acyl-CoA or acyl-ACP as the fatty acyl donor [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=214, Percent_Identity=30.8411214953271, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI15100175, Length=214, Percent_Identity=30.8411214953271, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI6041665, Length=230, Percent_Identity=30.8695652173913, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1789395, Length=235, Percent_Identity=47.6595744680851, Blast_Score=235, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17564032, Length=225, Percent_Identity=34.2222222222222, Blast_Score=127, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17568319, Length=238, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6320151, Length=243, Percent_Identity=31.2757201646091, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI24641614, Length=218, Percent_Identity=33.9449541284404, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24641612, Length=218, Percent_Identity=33.9449541284404, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI281364648, Length=249, Percent_Identity=27.3092369477912, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24582856, Length=249, Percent_Identity=27.3092369477912, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24582854, Length=249, Percent_Identity=27.3092369477912, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27401; Mature: 27401
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIVRSLLLAILLLMAFIVGSIACLLRPRHRDNVHMFAKWFSAVAPVLGIKVIVRRPQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC ASSEPCVYLANHQNNFDMFTHTAAVPKGTVSLGKKSIAWMPFFGQIYWLSGNILIDRKNR CCCCCEEEEECCCCCCCHHEECCCCCCCHHHHCCCCEEECCCCCEEEEEECCEEEECCCC NRAFETMANTARKIKDKCLSVWIFPEGTRSRGRGLLPFKAGAFHTAIAAGVPMVPVLASN CHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC QCHIKLNRWNNGVVIIEQMEPFETKGLDKSQVKELSERIHAAMSARLEQLNREADALMGR CEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAN HHCCC >Mature Secondary Structure MLLIVRSLLLAILLLMAFIVGSIACLLRPRHRDNVHMFAKWFSAVAPVLGIKVIVRRPQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC ASSEPCVYLANHQNNFDMFTHTAAVPKGTVSLGKKSIAWMPFFGQIYWLSGNILIDRKNR CCCCCEEEEECCCCCCCHHEECCCCCCCHHHHCCCCEEECCCCCEEEEEECCEEEECCCC NRAFETMANTARKIKDKCLSVWIFPEGTRSRGRGLLPFKAGAFHTAIAAGVPMVPVLASN CHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC QCHIKLNRWNNGVVIIEQMEPFETKGLDKSQVKELSERIHAAMSARLEQLNREADALMGR CEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAN HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1557036; 9278503 [H]