Click here to switch to the map view.

The map label for this gene is 119776272

Identifier: 119776272

GI number: 119776272

Start: 3727816

End: 3728571

Strand: Reverse

Name: 119776272

Synonym: Sama_3140

Alternate gene names: NA

Gene position: 3728571-3727816 (Counterclockwise)

Preceding gene: 119776273

Following gene: 119776271

Centisome position: 86.59

GC content: 60.32

Gene sequence:

>756_bases
ATGTTTGACTGGGATCTGCTGGACATATTGCTGCCGGCGTTGGCCGCCGGGGTATTGGTGCTATCTACCCATGTGCTGCT
GGGGCGCCAGGTACTTAAGCGTGGCATCATCTTTATCGATTTGGCCATTGCTCAGGTGGCGGCGTTGGGGGCCATTGTGG
CTCACATGCACCCTGTGCTGGAGGACGCGCCATTTTCGGGAGTCTGGATGCCTGCGCTCTTTGCTCTGGCCGGTGCCGGG
GGGATTGCCTGGCTCTCGCGGCGCATGGCCGATGAGTTGGAGGCCATGATCGGTTGCCTGTATGTGCTGGCGGCCGTGGG
CGCCATGCTGCTGCTCGCCAATGACCCCCATGGTGCGGAGCTCCTCAAACAGCTGATGTCCGGTCAGATCCTCTGGGTAA
GCTGGGAGCAGCTTTATCTGCCGGCGCTGGTATCTGCTGCGGTGTTGGCGCTTATCGTGGCGCGGCCAACCGTACTCGAT
GGGGCGGGTTTCTACCTGGTGTTTGCCCTGGTGATCACCCTGTCGGTTGAGCTGGTGGGGGTGTATCTGGTGTTCAGTAC
CCTGATTTTGCCCGCGCTGGCGGTGAATAAACTCAACTGCGCCAAAGCCTTGGGCTGGGCTTATCTGGTAGGTCTTTGCG
GTTACCTCGCCGGGCTGTTGCTGTCGGCCATGTTCGACTTGCCGAGTGGCGCCATGATAGTGGCAACCCTGGCGCTATCG
GCCATGGTATTCCGACTGGTGTCAGCCAAGCGATAA

Upstream 100 bases:

>100_bases
GCTGGTGCTGCCCATGTCTGTGGGAGGCAATGATGAAAGCCAGGATCTGTTCAGTCTCTACGACAGCGTGATTAACCTTT
TGAAAGGGGCGAACTGATCT

Downstream 100 bases:

>100_bases
ACCCTGAAAAGCCCGCCGTTAGGCGGGCTTTAACTTTATGAATTTAATGATTAATTAATAAATCAGCGCACACGTGTAAA
CAAAATATTGTTCCCGTCAT

Product: ABC 3 transport family protein

Products: NA

Alternate protein names: ABC 3 Transport Family Protein; Zinc/Manganese Transport System Permease Protein; Metal Ion ABC Transporter Permease; Zinc ABC Transporter Permease Protein ZnuB; Metal Ion ABC Transporter Permease Component; ABC-Type Mn2+/Zn2+ Transport System Permease Component

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MFDWDLLDILLPALAAGVLVLSTHVLLGRQVLKRGIIFIDLAIAQVAALGAIVAHMHPVLEDAPFSGVWMPALFALAGAG
GIAWLSRRMADELEAMIGCLYVLAAVGAMLLLANDPHGAELLKQLMSGQILWVSWEQLYLPALVSAAVLALIVARPTVLD
GAGFYLVFALVITLSVELVGVYLVFSTLILPALAVNKLNCAKALGWAYLVGLCGYLAGLLLSAMFDLPSGAMIVATLALS
AMVFRLVSAKR

Sequences:

>Translated_251_residues
MFDWDLLDILLPALAAGVLVLSTHVLLGRQVLKRGIIFIDLAIAQVAALGAIVAHMHPVLEDAPFSGVWMPALFALAGAG
GIAWLSRRMADELEAMIGCLYVLAAVGAMLLLANDPHGAELLKQLMSGQILWVSWEQLYLPALVSAAVLALIVARPTVLD
GAGFYLVFALVITLSVELVGVYLVFSTLILPALAVNKLNCAKALGWAYLVGLCGYLAGLLLSAMFDLPSGAMIVATLALS
AMVFRLVSAKR
>Mature_251_residues
MFDWDLLDILLPALAAGVLVLSTHVLLGRQVLKRGIIFIDLAIAQVAALGAIVAHMHPVLEDAPFSGVWMPALFALAGAG
GIAWLSRRMADELEAMIGCLYVLAAVGAMLLLANDPHGAELLKQLMSGQILWVSWEQLYLPALVSAAVLALIVARPTVLD
GAGFYLVFALVITLSVELVGVYLVFSTLILPALAVNKLNCAKALGWAYLVGLCGYLAGLLLSAMFDLPSGAMIVATLALS
AMVFRLVSAKR

Specific function: Unknown

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26549; Mature: 26549

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWDLLDILLPALAAGVLVLSTHVLLGRQVLKRGIIFIDLAIAQVAALGAIVAHMHPVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EDAPFSGVWMPALFALAGAGGIAWLSRRMADELEAMIGCLYVLAAVGAMLLLANDPHGAE
HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLKQLMSGQILWVSWEQLYLPALVSAAVLALIVARPTVLDGAGFYLVFALVITLSVELVG
HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VYLVFSTLILPALAVNKLNCAKALGWAYLVGLCGYLAGLLLSAMFDLPSGAMIVATLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AMVFRLVSAKR
HHHHHHHHCCC
>Mature Secondary Structure
MFDWDLLDILLPALAAGVLVLSTHVLLGRQVLKRGIIFIDLAIAQVAALGAIVAHMHPVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EDAPFSGVWMPALFALAGAGGIAWLSRRMADELEAMIGCLYVLAAVGAMLLLANDPHGAE
HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLKQLMSGQILWVSWEQLYLPALVSAAVLALIVARPTVLDGAGFYLVFALVITLSVELVG
HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VYLVFSTLILPALAVNKLNCAKALGWAYLVGLCGYLAGLLLSAMFDLPSGAMIVATLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AMVFRLVSAKR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA