Click here to switch to the map view.

The map label for this gene is 119776260

Identifier: 119776260

GI number: 119776260

Start: 3708934

End: 3711318

Strand: Reverse

Name: 119776260

Synonym: Sama_3128

Alternate gene names: NA

Gene position: 3711318-3708934 (Counterclockwise)

Preceding gene: 119776261

Following gene: 119776259

Centisome position: 86.19

GC content: 61.34

Gene sequence:

>2385_bases
ATGAAACCCTCGACTCTCGCCCTGGCGCTAATGCTTGCGAGCACACCGGCCATGTCAGTCTGGGCCGCCGATAACCCGGC
CGCCATTATCAAACAGAGCCAATCGGCCAGAGGGTTTCTGAATTTCCACTACGACAACAAGGGCGAGGTCTTTGTTGAGG
CTAACCGGCTCAACCAGCCATTCTTGCTGGTGACCAGCCTGCCTCAGGGCGTGGGGTCCAACGATATCGGTCTCGATCGC
GGCCAGCTGGGTCGCACCCGCATGGTGCAGTTTGAGCGCATAGGTCCGGATCTTATCCTGCGTGAGCTCAATACCCGCTA
TCGTGCCGGCAGCGACTATGCCCCCGAGCAGCGGGCGGTCAAAGAGGCCTTTGCCGATTCTATTTTGTGGCGTGCCTCGC
TGCTGGATGGCAAAACGCCGCTGGCCCCCCTGAGCGCACTGATCATCAATGACCTGCACGGCGTGAGTGACGCCCTCAAG
GCGTCGGGGCAGGGCAGTTTCAGTCTGGATAAATCACGCTCGCTTATCATCCCCGAGTATGTGAAATCCTTCCCCAATAA
CAGCGATTTGGACGTGCAGCTGACCTTTGCCAGCGCCGAGCCCGGCGCCTATGTGGCCCAGGTCACGCCGGATCCCAAGG
CCATCTCCATCCGCATGCGCTTCTCGTTTATTGCCCTGCCAGAGGCAGGTTACACCGCGCGCAATTACCACCCCCAGAGT
GGCTATCTGTCTGATGAATATCTGGATTATGCCAGCGCTATCGACACCCCGGTGGTAAAACGCCACCTGCTGCGCCATCG
CCTGCAAAAGCAAACGCCCGGCGCTGCCCCCTCTGAGGTGGTGGAGCCCATCATCTATTACCTCGACCCGGGCGTGCCCG
AGCCCATCCGCAGTGCGCTGCTGGATGGCGGCCGCTGGTGGGAAGAGGCCTTTAACGCCGCCGGTTTTATCAATGGCTTT
AAGATGGAGCTCTTGCCCGACGATGCCGACCCCCAGGATGTACGCTACAACGTAGTGCAGTGGGTGCACCGTGCCAGCCG
TGGCTGGTCTTACGGCTCGGCCATTGCCGACCCGCGCACCGGCGAAATCATCAAGGGCCACGTGACCCTGGGAAGCCTGC
GGGTCAGGCAGGACCACCTGATTGCCCGTGGCCTCACCGCAGGCTGGGAAGACAGAGACGCCGCCGCCAAGGCCGCAGAG
CACCTCGCGCTGGAGCGGATTCGCCAGCTGTCGGCCCACGAGATTGGCCACACCCTGGGCCTGGACCATAACTTCGCCGC
GTCCAGCAACAACAATGCCTCCGTGATGGATTACCCCCATCCCATGGTGACCCTCAGCAATGGCAAAATCGACATCAGTC
AGCCCTATGTGCCTGGCGTGGGTGCCTGGGACAAGTTTGCCATTGCTTACGGCTACGGCGACTTTGGTGATAACGAGGCC
GAAGGCCTGTCCACACTCCTTGCCGAGGTGCAGACCAAGGGCCTTAGATACATTGGCGAGAGCGATTCCCGAAGCCCGGA
TGCCAGCCACGCCTACGCCAGCCTGTGGGACAATGGCGCCGATCCGGTCGCCGAGCTTGCCCGCCTGCAACAGGTGCGGC
AAAAGGCGCTGGCCGATTTTAATCCCGAGGCCTTGCTCCCCGGCGAGCCACAGGGGGAGCTGGCCGACAGCCTGGTGCCC
ATTTATCTCCTGAGCCGCTATCAAATCGAGGCGGCGGCCAAGCTGATTGGCGGCACCGACTATGGCTACGATGGTGTATA
CAGCTGGCATTATGTGGCCCCCGAGCTGCAAAAACAGGCGCTGGGCACCCTGTTGGTCACCCTGGATACCGCCGAGCTGA
CCCTGTCCCGTGAGCTGGTGGAGTCGCTGCTGCCCAAACAGGGTAACTACAGCGCTGGCCGCGAGAGCTTTGCCTCGGGC
CTGGGGATAGTGGCCGACCCACTTGGCATGGCCGAGGTGCTGTCGCGCCATACCCTCAAAGCGCTGCTGGCACCCAAGCG
CCTTAACCGTGTCGAGCAGGGATTCCAGAGCGACAGCGAGCAGCTGTCGGTCAATGAGCTGCTGGACAAGCTGATGGCCG
TGACCCTGTATCAGGAAGGCAAAACAGGCCTTGAGCGTGGCGTCTGGATGCGCCTCAATGCGGTGGTGATAGATACCTTG
CTTGAGACCTTCCACCACGAGGACACCAGTGCCGAGGTCAAGGCGGTACTGGGAGCCAAACTGGCTTACACCATCAAGCA
GCTGGAGCGTAAAGCCAGCCGCTCCAGCGAGGCTGATGCCGCCCACTTCAAGTATTTGGCGCTGGGCGTTGCCAGGGGGC
TGGATGACGCCAAGGTGCGGATTATCACCAAACCATTGCCCATGCCACCCGGCTCACCCATTTAA

Upstream 100 bases:

>100_bases
AGCCCATAGTGCTCAACGAACTCTTTGAAACCCTGAGCCACTGGATAGGACATAAAGAAAAACACAGGGGCAACCCCTAG
CCCCATAACAAGGAGATAAG

Downstream 100 bases:

>100_bases
GCCGCAAGCGCTGTAAACAAAGAGGCCCGCCATTTGCGGGCTTTTTTCTTGTCCGGCGCCATTGTGGCCCGGCTCTCAAG
CCATGATGTCCATCAGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MKPSTLALALMLASTPAMSVWAADNPAAIIKQSQSARGFLNFHYDNKGEVFVEANRLNQPFLLVTSLPQGVGSNDIGLDR
GQLGRTRMVQFERIGPDLILRELNTRYRAGSDYAPEQRAVKEAFADSILWRASLLDGKTPLAPLSALIINDLHGVSDALK
ASGQGSFSLDKSRSLIIPEYVKSFPNNSDLDVQLTFASAEPGAYVAQVTPDPKAISIRMRFSFIALPEAGYTARNYHPQS
GYLSDEYLDYASAIDTPVVKRHLLRHRLQKQTPGAAPSEVVEPIIYYLDPGVPEPIRSALLDGGRWWEEAFNAAGFINGF
KMELLPDDADPQDVRYNVVQWVHRASRGWSYGSAIADPRTGEIIKGHVTLGSLRVRQDHLIARGLTAGWEDRDAAAKAAE
HLALERIRQLSAHEIGHTLGLDHNFAASSNNNASVMDYPHPMVTLSNGKIDISQPYVPGVGAWDKFAIAYGYGDFGDNEA
EGLSTLLAEVQTKGLRYIGESDSRSPDASHAYASLWDNGADPVAELARLQQVRQKALADFNPEALLPGEPQGELADSLVP
IYLLSRYQIEAAAKLIGGTDYGYDGVYSWHYVAPELQKQALGTLLVTLDTAELTLSRELVESLLPKQGNYSAGRESFASG
LGIVADPLGMAEVLSRHTLKALLAPKRLNRVEQGFQSDSEQLSVNELLDKLMAVTLYQEGKTGLERGVWMRLNAVVIDTL
LETFHHEDTSAEVKAVLGAKLAYTIKQLERKASRSSEADAAHFKYLALGVARGLDDAKVRIITKPLPMPPGSPI

Sequences:

>Translated_794_residues
MKPSTLALALMLASTPAMSVWAADNPAAIIKQSQSARGFLNFHYDNKGEVFVEANRLNQPFLLVTSLPQGVGSNDIGLDR
GQLGRTRMVQFERIGPDLILRELNTRYRAGSDYAPEQRAVKEAFADSILWRASLLDGKTPLAPLSALIINDLHGVSDALK
ASGQGSFSLDKSRSLIIPEYVKSFPNNSDLDVQLTFASAEPGAYVAQVTPDPKAISIRMRFSFIALPEAGYTARNYHPQS
GYLSDEYLDYASAIDTPVVKRHLLRHRLQKQTPGAAPSEVVEPIIYYLDPGVPEPIRSALLDGGRWWEEAFNAAGFINGF
KMELLPDDADPQDVRYNVVQWVHRASRGWSYGSAIADPRTGEIIKGHVTLGSLRVRQDHLIARGLTAGWEDRDAAAKAAE
HLALERIRQLSAHEIGHTLGLDHNFAASSNNNASVMDYPHPMVTLSNGKIDISQPYVPGVGAWDKFAIAYGYGDFGDNEA
EGLSTLLAEVQTKGLRYIGESDSRSPDASHAYASLWDNGADPVAELARLQQVRQKALADFNPEALLPGEPQGELADSLVP
IYLLSRYQIEAAAKLIGGTDYGYDGVYSWHYVAPELQKQALGTLLVTLDTAELTLSRELVESLLPKQGNYSAGRESFASG
LGIVADPLGMAEVLSRHTLKALLAPKRLNRVEQGFQSDSEQLSVNELLDKLMAVTLYQEGKTGLERGVWMRLNAVVIDTL
LETFHHEDTSAEVKAVLGAKLAYTIKQLERKASRSSEADAAHFKYLALGVARGLDDAKVRIITKPLPMPPGSPI
>Mature_794_residues
MKPSTLALALMLASTPAMSVWAADNPAAIIKQSQSARGFLNFHYDNKGEVFVEANRLNQPFLLVTSLPQGVGSNDIGLDR
GQLGRTRMVQFERIGPDLILRELNTRYRAGSDYAPEQRAVKEAFADSILWRASLLDGKTPLAPLSALIINDLHGVSDALK
ASGQGSFSLDKSRSLIIPEYVKSFPNNSDLDVQLTFASAEPGAYVAQVTPDPKAISIRMRFSFIALPEAGYTARNYHPQS
GYLSDEYLDYASAIDTPVVKRHLLRHRLQKQTPGAAPSEVVEPIIYYLDPGVPEPIRSALLDGGRWWEEAFNAAGFINGF
KMELLPDDADPQDVRYNVVQWVHRASRGWSYGSAIADPRTGEIIKGHVTLGSLRVRQDHLIARGLTAGWEDRDAAAKAAE
HLALERIRQLSAHEIGHTLGLDHNFAASSNNNASVMDYPHPMVTLSNGKIDISQPYVPGVGAWDKFAIAYGYGDFGDNEA
EGLSTLLAEVQTKGLRYIGESDSRSPDASHAYASLWDNGADPVAELARLQQVRQKALADFNPEALLPGEPQGELADSLVP
IYLLSRYQIEAAAKLIGGTDYGYDGVYSWHYVAPELQKQALGTLLVTLDTAELTLSRELVESLLPKQGNYSAGRESFASG
LGIVADPLGMAEVLSRHTLKALLAPKRLNRVEQGFQSDSEQLSVNELLDKLMAVTLYQEGKTGLERGVWMRLNAVVIDTL
LETFHHEDTSAEVKAVLGAKLAYTIKQLERKASRSSEADAAHFKYLALGVARGLDDAKVRIITKPLPMPPGSPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86772; Mature: 86772

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSTLALALMLASTPAMSVWAADNPAAIIKQSQSARGFLNFHYDNKGEVFVEANRLNQP
CCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCC
FLLVTSLPQGVGSNDIGLDRGQLGRTRMVQFERIGPDLILRELNTRYRAGSDYAPEQRAV
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
KEAFADSILWRASLLDGKTPLAPLSALIINDLHGVSDALKASGQGSFSLDKSRSLIIPEY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECHHH
VKSFPNNSDLDVQLTFASAEPGAYVAQVTPDPKAISIRMRFSFIALPEAGYTARNYHPQS
HHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCC
GYLSDEYLDYASAIDTPVVKRHLLRHRLQKQTPGAAPSEVVEPIIYYLDPGVPEPIRSAL
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
LDGGRWWEEAFNAAGFINGFKMELLPDDADPQDVRYNVVQWVHRASRGWSYGSAIADPRT
HCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GEIIKGHVTLGSLRVRQDHLIARGLTAGWEDRDAAAKAAEHLALERIRQLSAHEIGHTLG
CCEEEEEEEECEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDHNFAASSNNNASVMDYPHPMVTLSNGKIDISQPYVPGVGAWDKFAIAYGYGDFGDNEA
CCCCCCCCCCCCCEEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHH
EGLSTLLAEVQTKGLRYIGESDSRSPDASHAYASLWDNGADPVAELARLQQVRQKALADF
HHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
NPEALLPGEPQGELADSLVPIYLLSRYQIEAAAKLIGGTDYGYDGVYSWHYVAPELQKQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH
LGTLLVTLDTAELTLSRELVESLLPKQGNYSAGRESFASGLGIVADPLGMAEVLSRHTLK
HCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
ALLAPKRLNRVEQGFQSDSEQLSVNELLDKLMAVTLYQEGKTGLERGVWMRLNAVVIDTL
HHHCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHH
LETFHHEDTSAEVKAVLGAKLAYTIKQLERKASRSSEADAAHFKYLALGVARGLDDAKVR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IITKPLPMPPGSPI
EEECCCCCCCCCCC
>Mature Secondary Structure
MKPSTLALALMLASTPAMSVWAADNPAAIIKQSQSARGFLNFHYDNKGEVFVEANRLNQP
CCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCC
FLLVTSLPQGVGSNDIGLDRGQLGRTRMVQFERIGPDLILRELNTRYRAGSDYAPEQRAV
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
KEAFADSILWRASLLDGKTPLAPLSALIINDLHGVSDALKASGQGSFSLDKSRSLIIPEY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECHHH
VKSFPNNSDLDVQLTFASAEPGAYVAQVTPDPKAISIRMRFSFIALPEAGYTARNYHPQS
HHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCC
GYLSDEYLDYASAIDTPVVKRHLLRHRLQKQTPGAAPSEVVEPIIYYLDPGVPEPIRSAL
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
LDGGRWWEEAFNAAGFINGFKMELLPDDADPQDVRYNVVQWVHRASRGWSYGSAIADPRT
HCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GEIIKGHVTLGSLRVRQDHLIARGLTAGWEDRDAAAKAAEHLALERIRQLSAHEIGHTLG
CCEEEEEEEECEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDHNFAASSNNNASVMDYPHPMVTLSNGKIDISQPYVPGVGAWDKFAIAYGYGDFGDNEA
CCCCCCCCCCCCCEEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHH
EGLSTLLAEVQTKGLRYIGESDSRSPDASHAYASLWDNGADPVAELARLQQVRQKALADF
HHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
NPEALLPGEPQGELADSLVPIYLLSRYQIEAAAKLIGGTDYGYDGVYSWHYVAPELQKQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH
LGTLLVTLDTAELTLSRELVESLLPKQGNYSAGRESFASGLGIVADPLGMAEVLSRHTLK
HCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
ALLAPKRLNRVEQGFQSDSEQLSVNELLDKLMAVTLYQEGKTGLERGVWMRLNAVVIDTL
HHHCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHH
LETFHHEDTSAEVKAVLGAKLAYTIKQLERKASRSSEADAAHFKYLALGVARGLDDAKVR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IITKPLPMPPGSPI
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA