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The map label for this gene is 119776241

Identifier: 119776241

GI number: 119776241

Start: 3682095

End: 3682835

Strand: Reverse

Name: 119776241

Synonym: Sama_3109

Alternate gene names: NA

Gene position: 3682835-3682095 (Counterclockwise)

Preceding gene: 119776245

Following gene: 119776240

Centisome position: 85.53

GC content: 53.17

Gene sequence:

>741_bases
ATGACGGAGTCTGACAGGGTTGTTCAGGTGCTGAAAAAGCAGCTCAGGGCAAGAGGTATTCACTATCAGCAGGTGGCTAC
AGCCCTTGGTCTGAGCGAAGCCTCAGTCAAGCGGCTGTTTGCCAACGGTGGCCGTCTGAGCCTTGCGCGATTGGCGATGG
TTTGCCGATTGCTTGAGATGGATTTGCCCGCTCTCTTCAGGCTGGTGGCGGATGAACGCGACCAACTCAGCGTGCTGACA
TGGGCTCAGGAAGAGCAGTTGGTGGCCGATAAGGCCTTGCTGCTGGTGGCCGTATGTGTGACCAATGGTTACCGCTTTGA
ACATATTCTCAGCCAGTACAACCTTAGCGAATTTCAGGTCATTCAAAAGCTGGCCCAGCTGGACAGACTTAAGGTAATTG
AGCTTTTGCCTGAAAACCGGATAAAGCTGAAGCTGGCCCCGTCTTTTGCCTGGATACCGGGTGGGCCCATTCAGCAGTTT
TTTCAGCAGCAGGTGATACGTACTTTTTTCCGCTCCGACTTTGCCGCCGATGATGAAAAACTCATGATGAGCACGGGCCT
GATGTCACTGCCGAGTAATCACAAATTTCAGCAGCGGATGCAGCAATTGGTGCACGAGTTTTATCAGGCTTGCGACAACG
ATGACAGTCTGGCGATGCAGGAGCGTCATGGCACCTCGATGATCATCGCCATCCGCCGCTGGCGTTTTCCACTTTTTGAA
GAGTTCAGCACCCGGGAATAG

Upstream 100 bases:

>100_bases
CACATTGCGTGTCGGCACCCCTATGTCTTATGTTCCATGGGCAGGCGTTGGTAGCAATCGCGGTTGAAAAGTAAGGCCGA
GGCATCAGGGAGGAGAGGAC

Downstream 100 bases:

>100_bases
GGTAAACAGTTGCATTCTGCCCTATCCCCAAGTGTGTGATCGTCACAAAAGTGGTATTCAGCGATACCAGACGGCTCACA
TGATGCCACTCTCGTCATCT

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Protein Containing HTH Domain; Transcriptional Regulator XRE Family; HTH Domain-Containing Protein; XRE Family Transcription Regulator Protein

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTESDRVVQVLKKQLRARGIHYQQVATALGLSEASVKRLFANGGRLSLARLAMVCRLLEMDLPALFRLVADERDQLSVLT
WAQEEQLVADKALLLVAVCVTNGYRFEHILSQYNLSEFQVIQKLAQLDRLKVIELLPENRIKLKLAPSFAWIPGGPIQQF
FQQQVIRTFFRSDFAADDEKLMMSTGLMSLPSNHKFQQRMQQLVHEFYQACDNDDSLAMQERHGTSMIIAIRRWRFPLFE
EFSTRE

Sequences:

>Translated_246_residues
MTESDRVVQVLKKQLRARGIHYQQVATALGLSEASVKRLFANGGRLSLARLAMVCRLLEMDLPALFRLVADERDQLSVLT
WAQEEQLVADKALLLVAVCVTNGYRFEHILSQYNLSEFQVIQKLAQLDRLKVIELLPENRIKLKLAPSFAWIPGGPIQQF
FQQQVIRTFFRSDFAADDEKLMMSTGLMSLPSNHKFQQRMQQLVHEFYQACDNDDSLAMQERHGTSMIIAIRRWRFPLFE
EFSTRE
>Mature_245_residues
TESDRVVQVLKKQLRARGIHYQQVATALGLSEASVKRLFANGGRLSLARLAMVCRLLEMDLPALFRLVADERDQLSVLTW
AQEEQLVADKALLLVAVCVTNGYRFEHILSQYNLSEFQVIQKLAQLDRLKVIELLPENRIKLKLAPSFAWIPGGPIQQFF
QQQVIRTFFRSDFAADDEKLMMSTGLMSLPSNHKFQQRMQQLVHEFYQACDNDDSLAMQERHGTSMIIAIRRWRFPLFEE
FSTRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28448; Mature: 28317

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESDRVVQVLKKQLRARGIHYQQVATALGLSEASVKRLFANGGRLSLARLAMVCRLLEM
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLPALFRLVADERDQLSVLTWAQEEQLVADKALLLVAVCVTNGYRFEHILSQYNLSEFQV
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
IQKLAQLDRLKVIELLPENRIKLKLAPSFAWIPGGPIQQFFQQQVIRTFFRSDFAADDEK
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LMMSTGLMSLPSNHKFQQRMQQLVHEFYQACDNDDSLAMQERHGTSMIIAIRRWRFPLFE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCCHHHH
EFSTRE
HHCCCC
>Mature Secondary Structure 
TESDRVVQVLKKQLRARGIHYQQVATALGLSEASVKRLFANGGRLSLARLAMVCRLLEM
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLPALFRLVADERDQLSVLTWAQEEQLVADKALLLVAVCVTNGYRFEHILSQYNLSEFQV
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
IQKLAQLDRLKVIELLPENRIKLKLAPSFAWIPGGPIQQFFQQQVIRTFFRSDFAADDEK
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LMMSTGLMSLPSNHKFQQRMQQLVHEFYQACDNDDSLAMQERHGTSMIIAIRRWRFPLFE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHCCHHHH
EFSTRE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA