Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776234

Identifier: 119776234

GI number: 119776234

Start: 3676130

End: 3676897

Strand: Reverse

Name: 119776234

Synonym: Sama_3102

Alternate gene names: NA

Gene position: 3676897-3676130 (Counterclockwise)

Preceding gene: 119776236

Following gene: 119776233

Centisome position: 85.39

GC content: 57.94

Gene sequence:

>768_bases
ATGTACAAGCTTCATCGCCTCAAGGGCCATATCCAGACCATCTATCTTGCCGAGCACCCCCAGGGGCTGGTGCTGCTGGA
TGGCTGTTGCCGTGCCGATGTTGCCCTGGTGTGCCATTTTATTCGCCACAAGCTCAAACGTTCCCTGGCTGAACTTAAGC
TGGTGGTGGTGACCCATATGCATCCGGATCATGCCGGTGGCGCCCATGCCCTGCGGGCTAAAACCGGTGCCCGTATTGTT
GCCGCCGACGTACCCGGCCACTGGTACCGGGGGCTGGATGGTATGGCTATGCACCTCACCGATATGGCGCTCGCTGCCTG
GGTTGCCAAGCGGCTTGGCAAGCCGATGCGTTGGCTATGGTATTCCCGTAAACTCAGAGCCGATATCTTGCTGGGAGACG
ATAGCCGTCTGCCTGAGTTTCCCGAGTGGCGGGTGTTTCATTGCCCCGGCCATACTGATCGGGATCTGGTGTTGCTTCAT
GAAGAAGAAGGCTGTGCCTATGTGGCCGATCTGCTGGTGAAGGTGAAAGGCAGGTTCATTCCACCTTTTCCGCTGTTTTA
TCCCAACCGTTACAAGAGCTCCCTGATGAAGCTCAAGTGTCTGGCACCTGCGCGGGTAATGCTGGCACACGGCGGCGAGG
TCAGTCTGGCAGAGATAGATTTGGACCGGGTGCTGGCCGAGTCTCCCACCGTGCCCATGACCCACTGGCGCTCGGTGAAA
ACCAAACTCAGGCAAATCCTCAATCGCCCTGAGCCACCTTCGGTATGA

Upstream 100 bases:

>100_bases
AGGAGCTTCGACTAAAGAAGCAGCTTCCCACGCCCTGAGTAGACTTGAGTGGTCTGATGAGTTTGGCCATAATCATCTTT
CCATGATTCAGGGAACGATT

Downstream 100 bases:

>100_bases
TGCAAGGTTTTATACCGGGTGGCGCCTTTTGCGTTGAGACCCCGGGTATGCTGATACCCAGATAGCTCCCCTTGCGAAGG
CCTGCATTCGTCGGCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Zinc Metallohydrolase

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MYKLHRLKGHIQTIYLAEHPQGLVLLDGCCRADVALVCHFIRHKLKRSLAELKLVVVTHMHPDHAGGAHALRAKTGARIV
AADVPGHWYRGLDGMAMHLTDMALAAWVAKRLGKPMRWLWYSRKLRADILLGDDSRLPEFPEWRVFHCPGHTDRDLVLLH
EEEGCAYVADLLVKVKGRFIPPFPLFYPNRYKSSLMKLKCLAPARVMLAHGGEVSLAEIDLDRVLAESPTVPMTHWRSVK
TKLRQILNRPEPPSV

Sequences:

>Translated_255_residues
MYKLHRLKGHIQTIYLAEHPQGLVLLDGCCRADVALVCHFIRHKLKRSLAELKLVVVTHMHPDHAGGAHALRAKTGARIV
AADVPGHWYRGLDGMAMHLTDMALAAWVAKRLGKPMRWLWYSRKLRADILLGDDSRLPEFPEWRVFHCPGHTDRDLVLLH
EEEGCAYVADLLVKVKGRFIPPFPLFYPNRYKSSLMKLKCLAPARVMLAHGGEVSLAEIDLDRVLAESPTVPMTHWRSVK
TKLRQILNRPEPPSV
>Mature_255_residues
MYKLHRLKGHIQTIYLAEHPQGLVLLDGCCRADVALVCHFIRHKLKRSLAELKLVVVTHMHPDHAGGAHALRAKTGARIV
AADVPGHWYRGLDGMAMHLTDMALAAWVAKRLGKPMRWLWYSRKLRADILLGDDSRLPEFPEWRVFHCPGHTDRDLVLLH
EEEGCAYVADLLVKVKGRFIPPFPLFYPNRYKSSLMKLKCLAPARVMLAHGGEVSLAEIDLDRVLAESPTVPMTHWRSVK
TKLRQILNRPEPPSV

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28954; Mature: 28954

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLHRLKGHIQTIYLAEHPQGLVLLDGCCRADVALVCHFIRHKLKRSLAELKLVVVTHM
CCCHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
HPDHAGGAHALRAKTGARIVAADVPGHWYRGLDGMAMHLTDMALAAWVAKRLGKPMRWLW
CCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
YSRKLRADILLGDDSRLPEFPEWRVFHCPGHTDRDLVLLHEEEGCAYVADLLVKVKGRFI
HHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCC
PPFPLFYPNRYKSSLMKLKCLAPARVMLAHGGEVSLAEIDLDRVLAESPTVPMTHWRSVK
CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCHHHHHHHH
TKLRQILNRPEPPSV
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MYKLHRLKGHIQTIYLAEHPQGLVLLDGCCRADVALVCHFIRHKLKRSLAELKLVVVTHM
CCCHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
HPDHAGGAHALRAKTGARIVAADVPGHWYRGLDGMAMHLTDMALAAWVAKRLGKPMRWLW
CCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
YSRKLRADILLGDDSRLPEFPEWRVFHCPGHTDRDLVLLHEEEGCAYVADLLVKVKGRFI
HHHHHEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCC
PPFPLFYPNRYKSSLMKLKCLAPARVMLAHGGEVSLAEIDLDRVLAESPTVPMTHWRSVK
CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCHHHHHHHH
TKLRQILNRPEPPSV
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA