Click here to switch to the map view.

The map label for this gene is yhbJ [C]

Identifier: 119776223

GI number: 119776223

Start: 3665749

End: 3666600

Strand: Direct

Name: yhbJ [C]

Synonym: Sama_3091

Alternate gene names: 119776223

Gene position: 3665749-3666600 (Clockwise)

Preceding gene: 119776222

Following gene: 119776224

Centisome position: 85.13

GC content: 53.4

Gene sequence:

>852_bases
ATGAAACTCGTTATAGTCTCCGGGCGCTCTGGCTCCGGAAAGTCGGTAGCCCTCAGGGTACTGGAAGACTTGGGCTACTA
CTGCGTCGATAATTTGCCATTACAGCTGATTGGGCCCTTGCTTGCCCAGCTTAAGGGTAATAACGACAAGGTCGCCATCA
GCATCGATATCCGCAATATGCCGGAGCAGGAAAAGGCCCTCGAAAAAGAGCTGGCAAGGCTCCCCGAAGGCGTCGAACTC
ACCAGCTTTTTCCTCAATTCCAGCGACAAGGTGCTGCTCAAACGCTACAGTGAAACCCGCCGTTTGCACCCCCTGTCCCG
CAGCAAGGTCTCATTGCAGGAAGCTATCAAGCTCGAAGGCAAAATGCTGGCGCCCATTTCCAATATGGTCGACCACTTCA
TCGATACCTCCAATCTGAATGTCTATGAACTGGCTGATGCTGTCAGGCAGATACTACTTGGTCGCACAGACAAAGAGCTG
GTGATCATCTTCGAATCCTTTGGTTTCAAGCACGGCATGCCCACAGAAGCAGACTTCATGTTTGATGCCCGCTTCTTGCC
CAATCCCCATTGGGAACCCGAGCTGAGGCCCCTCACTGGCCTCGATGAGCCGGTTAAGCTGTTTTTGGAACGTCAGGTGC
TGGTCAACAAGTACATCTGGCAAATCGAAAACCTGCTGGAAACCTGGTTGCCCCACCTGGAGCGTAACAATCGCAGCTAC
CTCACCATTGCCATTGGCTGCACCGGTGGTCAACACCGTTCTGTGTATATTGCCGAGCAGCTTGCCAAGCGCTTCGCCAA
CTCTCACCACAAGGTTGAGGCCCGCCATCGGGAACTGAATGCCAAAGCTTGA

Upstream 100 bases:

>100_bases
GCACCCTGGCCGCTATGGCCGAAAAGCTGAATGACAAGCAGATCCTCAAGCAGCTGCGTAAAAGCCACGATGAAAAGGAA
CTTTACCAGGTAATCATCGG

Downstream 100 bases:

>100_bases
ACGTGACGTCACCATAGTCAATAAACTGGGCCTGCATGCCCGCGCTGCCACCAAGCTGGCGGTATTGGCGTCGGAATTCA
AGGCCAGCGTGACGCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNMPEQEKALEKELARLPEGVEL
TSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEAIKLEGKMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKEL
VIIFESFGFKHGMPTEADFMFDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRELNAKA

Sequences:

>Translated_283_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNMPEQEKALEKELARLPEGVEL
TSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEAIKLEGKMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKEL
VIIFESFGFKHGMPTEADFMFDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRELNAKA
>Mature_283_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNMPEQEKALEKELARLPEGVEL
TSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEAIKLEGKMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKEL
VIIFESFGFKHGMPTEADFMFDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRELNAKA

Specific function: Displays ATPase and GTPase activities

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family

Homologues:

Organism=Escherichia coli, GI1789598, Length=282, Percent_Identity=54.6099290780142, Blast_Score=335, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3091_SHEAM (A1SA87)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928963.1
- ProteinModelPortal:   A1SA87
- STRING:   A1SA87
- GeneID:   4605338
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_3091
- NMPDR:   fig|326297.7.peg.2907
- eggNOG:   COG1660
- HOGENOM:   HBG289732
- OMA:   GIGCTGG
- PhylomeDB:   A1SA87
- ProtClustDB:   PRK05416
- HAMAP:   MF_00636
- InterPro:   IPR005337
- PIRSF:   PIRSF005052

Pfam domain/function: PF03668 ATP_bind_2

EC number: NA

Molecular weight: Translated: 32295; Mature: 32295

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNM
CEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC
PEQEKALEKELARLPEGVELTSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEAIKLEG
CHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
KMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKELVIIFESFGFKHGMPTEADFM
CEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE
FDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRELNAKA
EEEEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNNDKVAISIDIRNM
CEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC
PEQEKALEKELARLPEGVELTSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEAIKLEG
CHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
KMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKELVIIFESFGFKHGMPTEADFM
CEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEE
FDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLERNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRELNAKA
EEEEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA