Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is ptsO [H]

Identifier: 119776224

GI number: 119776224

Start: 3666587

End: 3666862

Strand: Direct

Name: ptsO [H]

Synonym: Sama_3092

Alternate gene names: 119776224

Gene position: 3666587-3666862 (Clockwise)

Preceding gene: 119776223

Following gene: 119776225

Centisome position: 85.15

GC content: 58.33

Gene sequence:

>276_bases
ATGCCAAAGCTTGAACGTGACGTCACCATAGTCAATAAACTGGGCCTGCATGCCCGCGCTGCCACCAAGCTGGCGGTATT
GGCGTCGGAATTCAAGGCCAGCGTGACGCTGGTTCAGGGCGCCAAACAGGCTTCGGCCGCCAGCGTGCTGGGTCTCCTGA
TGCTCGAATCCGGAATGGGCAAAACCATCCATATTATCGCCGAAGGGGAAGACGCCGAGCAGGCCATGGATGCCGTGTGT
AACCTTATCAACGCCCGCTTCGACGAAGACTGCTGA

Upstream 100 bases:

>100_bases
TGCACCGGTGGTCAACACCGTTCTGTGTATATTGCCGAGCAGCTTGCCAAGCGCTTCGCCAACTCTCACCACAAGGTTGA
GGCCCGCCATCGGGAACTGA

Downstream 100 bases:

>100_bases
CCCGGCTTCACTTCGTCCATCCCATTAAATTTGCTAATATATCCCCCAATTCATCTCTTGGGGGAAAGCGATGGCTGTCG
AACTTCTGGATAACGAGCAA

Product: phosphocarrier protein NPR

Products: NA

Alternate protein names: Nitrogen-related HPr [H]

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVC
NLINARFDEDC

Sequences:

>Translated_91_residues
MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVC
NLINARFDEDC
>Mature_90_residues
PKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVCN
LINARFDEDC

Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the p

COG id: COG1925

COG function: function code G; Phosphotransferase system, HPr-related proteins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPr domain [H]

Homologues:

Organism=Escherichia coli, GI1789599, Length=88, Percent_Identity=45.4545454545455, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001020
- InterPro:   IPR005698
- InterPro:   IPR000032 [H]

Pfam domain/function: PF00381 PTS-HPr [H]

EC number: NA

Molecular weight: Translated: 9611; Mature: 9480

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00369 PTS_HPR_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMG
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
KTIHIIAEGEDAEQAMDAVCNLINARFDEDC
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMG
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
KTIHIIAEGEDAEQAMDAVCNLINARFDEDC
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10760597 [H]