| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ptsO [H]
Identifier: 119776224
GI number: 119776224
Start: 3666587
End: 3666862
Strand: Direct
Name: ptsO [H]
Synonym: Sama_3092
Alternate gene names: 119776224
Gene position: 3666587-3666862 (Clockwise)
Preceding gene: 119776223
Following gene: 119776225
Centisome position: 85.15
GC content: 58.33
Gene sequence:
>276_bases ATGCCAAAGCTTGAACGTGACGTCACCATAGTCAATAAACTGGGCCTGCATGCCCGCGCTGCCACCAAGCTGGCGGTATT GGCGTCGGAATTCAAGGCCAGCGTGACGCTGGTTCAGGGCGCCAAACAGGCTTCGGCCGCCAGCGTGCTGGGTCTCCTGA TGCTCGAATCCGGAATGGGCAAAACCATCCATATTATCGCCGAAGGGGAAGACGCCGAGCAGGCCATGGATGCCGTGTGT AACCTTATCAACGCCCGCTTCGACGAAGACTGCTGA
Upstream 100 bases:
>100_bases TGCACCGGTGGTCAACACCGTTCTGTGTATATTGCCGAGCAGCTTGCCAAGCGCTTCGCCAACTCTCACCACAAGGTTGA GGCCCGCCATCGGGAACTGA
Downstream 100 bases:
>100_bases CCCGGCTTCACTTCGTCCATCCCATTAAATTTGCTAATATATCCCCCAATTCATCTCTTGGGGGAAAGCGATGGCTGTCG AACTTCTGGATAACGAGCAA
Product: phosphocarrier protein NPR
Products: NA
Alternate protein names: Nitrogen-related HPr [H]
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVC NLINARFDEDC
Sequences:
>Translated_91_residues MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVC NLINARFDEDC >Mature_90_residues PKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMGKTIHIIAEGEDAEQAMDAVCN LINARFDEDC
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the p
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1789599, Length=88, Percent_Identity=45.4545454545455, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 9611; Mature: 9480
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00369 PTS_HPR_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMG CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC KTIHIIAEGEDAEQAMDAVCNLINARFDEDC CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PKLERDVTIVNKLGLHARAATKLAVLASEFKASVTLVQGAKQASAASVLGLLMLESGMG CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC KTIHIIAEGEDAEQAMDAVCNLINARFDEDC CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10760597 [H]