The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is bfd [C]

Identifier: 119776172

GI number: 119776172

Start: 3617252

End: 3617443

Strand: Direct

Name: bfd [C]

Synonym: Sama_3040

Alternate gene names: 119776172

Gene position: 3617252-3617443 (Clockwise)

Preceding gene: 119776171

Following gene: 119776180

Centisome position: 84.0

GC content: 51.56

Gene sequence:

>192_bases
ATGTATGTCTGTGTTTGTTATGCCGTGACAGATACCCAAATCCAGGAAGCCGTTCATCAGGGCGATATTACCTTGGCCGC
GGTGAAAAAACGCCTGGGTGTTGGCAGCCAGTGTGGTAAATGCATTCAAACGACCCTCGAAGTGATTCAGCGCCAGCTGG
ACGTCGAGCCCAATTACTACGAAGTCGCCTGA

Upstream 100 bases:

>100_bases
TAAGTGAGAAATAGCTCACCTATATAAAAAAGCGTTATTGATGATGAGAACGGTTTTTATTTATAATCCACATCATTCAA
CCGCCGGAGCATTTTTCACC

Downstream 100 bases:

>100_bases
TACGGCATACTTTTCTCTCACTCAAGCAGCTGACCCCAAACGGCGCAAGGTAAGGTTTAGCTGCGCAGTCTGCGACTCAG
ATTCAAATAAAAAAGCACTG

Product: bacterioferritin-associated ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MYVCVCYAVTDTQIQEAVHQGDITLAAVKKRLGVGSQCGKCIQTTLEVIQRQLDVEPNYYEVA

Sequences:

>Translated_63_residues
MYVCVCYAVTDTQIQEAVHQGDITLAAVKKRLGVGSQCGKCIQTTLEVIQRQLDVEPNYYEVA
>Mature_63_residues
MYVCVCYAVTDTQIQEAVHQGDITLAAVKKRLGVGSQCGKCIQTTLEVIQRQLDVEPNYYEVA

Specific function: Seems To Associate With Bfr; Could Be A General Redox And/Or Regulatory Component Participating In The Iron Storage Mobilization Functions Of Bfr. Could Participate In The Release Or The Delivery Of Iron From/To Bacterioferritin (Or Other Iron Complexes)

COG id: COG2906

COG function: function code P; Bacterioferritin-associated ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6992; Mature: 6992

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVCVCYAVTDTQIQEAVHQGDITLAAVKKRLGVGSQCGKCIQTTLEVIQRQLDVEPNYY
CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEE
EVA
ECC
>Mature Secondary Structure
MYVCVCYAVTDTQIQEAVHQGDITLAAVKKRLGVGSQCGKCIQTTLEVIQRQLDVEPNYY
CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEE
EVA
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA