Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is astA [H]

Identifier: 119776142

GI number: 119776142

Start: 3582765

End: 3583784

Strand: Reverse

Name: astA [H]

Synonym: Sama_3010

Alternate gene names: 119776142

Gene position: 3583784-3582765 (Counterclockwise)

Preceding gene: 119776143

Following gene: 119776141

Centisome position: 83.22

GC content: 55.59

Gene sequence:

>1020_bases
ATGTTGATCATTCGTCCAATCCGGGCCAGCGATTTTGATGCCCTGTACCGCATTGCGGTGGAGTCGGGCCACGGCTTCAC
TTCACTGCCGGTTAACGAAGACTTGTTGCGTCGCAAAATAGCGCGCTCTGAAGCCTCTTTTCAAAAGGTCGTGGAAACCC
CTTACGATGAAGGCTACCTGATGGTGCTCGAAGACACACAGACCCAGGAAGTGGTGGGCACCTGTGCACTCGAGGCCGCC
GTGGGGATGGAAGATGCCTTCTACCATTATCGTCTCGGCACCGAGGTATATCATTCGCAGCAAATCAATGTGCGCAACGA
AGTTGAGACCCTCACCCTCTGTCACGACTACACAGGCGCCGCCGAGCTTTGCACCCTGTTTTTGCGTGGGGCGTATCGCA
AAGACAACAATGGTCGCATGCTCTCCCGCAGCCGTTTTCTGTTTTTGGCCCAGCACGCCAATCGTTTCGGGGAAACCGTG
ATTGCCGAAATGCGTGGTGTCAGCGATGAAAACGGCAATTCCCCGTTTTATGGCTGGCTGCAAAAGCACTTCCTCGGTAT
CGACTTTGTCGAAGCCGACTATCTCTCTGGTTTGGGACGCAAAGCCTTTATGGCCGAGATGATGCCCAGAAACCCGGTAT
ATGTGTGTTTGCTCCCCGAAGAAGCCCAGAAGGTGATTGGCGAAGTGCATACAAACACCCGTCCGGCCTTGAGTTTGCTG
CGGGCCGAAGGTTTCCGCTGCCGCGGATATGTGGACATATTCGACGGTGGCCCAACGGTGGAGTGCAATCTGCAGGATAT
CCGCGGCGTGCGCGAAAGCCGCCTGCTGACGGTTCGCATCGGTGAGATGCCCGCCTCAGATGACAGTTTTATTCTCTCCA
ACACCCAGCTTGTGGATTACCGTGCAACCTCGGTCGAGCTGATGGTTTCCTCCGATTCAGATGAAGTGATACTCAGCCCT
GAGCTGGCGGCTGGCCTTCTGGTCAGTGACGGCGAGCAGGTGCGGGTACTGGCAATATAG

Upstream 100 bases:

>100_bases
GACATCCGATTTCACCGAACCAGCCGGTGAGGCTTGGTGCACGCCGGAAAGGTCAAAACGCTTAAAAAAACAGCGGGCAG
GACAGAGAGGAGATACTCAA

Downstream 100 bases:

>100_bases
GAATTCGACATGACGCAATTTATCAATGGCCAGTGGCTCGCTGGCGAAGGCAAAGAGATGCAGTCAAAAAACCCCGCCAA
CGGCGAGGTGATTTGGCAGG

Product: arginine N-succinyltransferase

Products: NA

Alternate protein names: AST; AOST [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA
VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV
IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL
RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP
ELAAGLLVSDGEQVRVLAI

Sequences:

>Translated_339_residues
MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA
VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV
IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL
RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP
ELAAGLLVSDGEQVRVLAI
>Mature_339_residues
MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA
VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV
IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL
RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP
ELAAGLLVSDGEQVRVLAI

Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]

COG id: COG3138

COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine N-succinyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1788043, Length=342, Percent_Identity=45.6140350877193, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR007041
- InterPro:   IPR017650 [H]

Pfam domain/function: PF04958 AstA [H]

EC number: =2.3.1.109 [H]

Molecular weight: Translated: 37972; Mature: 37972

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYL
CEEEEECCCCCHHHEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
MVLEDTQTQEVVGTCALEAAVGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGA
EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCCCH
AELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETVIAEMRGVSDENGNSPFYGWL
HHHHHHHHHHCCEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL
HHHHCCCEEEHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHH
RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDY
HHCCCEEEEEEEEECCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEE
RATSVELMVSSDSDEVILSPELAAGLLVSDGEQVRVLAI
EECEEEEEEECCCCCEEECCCHHCCEEECCCCEEEEEEC
>Mature Secondary Structure
MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYL
CEEEEECCCCCHHHEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
MVLEDTQTQEVVGTCALEAAVGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGA
EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCCCH
AELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETVIAEMRGVSDENGNSPFYGWL
HHHHHHHHHHCCEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL
HHHHCCCEEEHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHH
RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDY
HHCCCEEEEEEEEECCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEE
RATSVELMVSSDSDEVILSPELAAGLLVSDGEQVRVLAI
EECEEEEEEECCCCCEEECCCHHCCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA