| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is astA [H]
Identifier: 119776142
GI number: 119776142
Start: 3582765
End: 3583784
Strand: Reverse
Name: astA [H]
Synonym: Sama_3010
Alternate gene names: 119776142
Gene position: 3583784-3582765 (Counterclockwise)
Preceding gene: 119776143
Following gene: 119776141
Centisome position: 83.22
GC content: 55.59
Gene sequence:
>1020_bases ATGTTGATCATTCGTCCAATCCGGGCCAGCGATTTTGATGCCCTGTACCGCATTGCGGTGGAGTCGGGCCACGGCTTCAC TTCACTGCCGGTTAACGAAGACTTGTTGCGTCGCAAAATAGCGCGCTCTGAAGCCTCTTTTCAAAAGGTCGTGGAAACCC CTTACGATGAAGGCTACCTGATGGTGCTCGAAGACACACAGACCCAGGAAGTGGTGGGCACCTGTGCACTCGAGGCCGCC GTGGGGATGGAAGATGCCTTCTACCATTATCGTCTCGGCACCGAGGTATATCATTCGCAGCAAATCAATGTGCGCAACGA AGTTGAGACCCTCACCCTCTGTCACGACTACACAGGCGCCGCCGAGCTTTGCACCCTGTTTTTGCGTGGGGCGTATCGCA AAGACAACAATGGTCGCATGCTCTCCCGCAGCCGTTTTCTGTTTTTGGCCCAGCACGCCAATCGTTTCGGGGAAACCGTG ATTGCCGAAATGCGTGGTGTCAGCGATGAAAACGGCAATTCCCCGTTTTATGGCTGGCTGCAAAAGCACTTCCTCGGTAT CGACTTTGTCGAAGCCGACTATCTCTCTGGTTTGGGACGCAAAGCCTTTATGGCCGAGATGATGCCCAGAAACCCGGTAT ATGTGTGTTTGCTCCCCGAAGAAGCCCAGAAGGTGATTGGCGAAGTGCATACAAACACCCGTCCGGCCTTGAGTTTGCTG CGGGCCGAAGGTTTCCGCTGCCGCGGATATGTGGACATATTCGACGGTGGCCCAACGGTGGAGTGCAATCTGCAGGATAT CCGCGGCGTGCGCGAAAGCCGCCTGCTGACGGTTCGCATCGGTGAGATGCCCGCCTCAGATGACAGTTTTATTCTCTCCA ACACCCAGCTTGTGGATTACCGTGCAACCTCGGTCGAGCTGATGGTTTCCTCCGATTCAGATGAAGTGATACTCAGCCCT GAGCTGGCGGCTGGCCTTCTGGTCAGTGACGGCGAGCAGGTGCGGGTACTGGCAATATAG
Upstream 100 bases:
>100_bases GACATCCGATTTCACCGAACCAGCCGGTGAGGCTTGGTGCACGCCGGAAAGGTCAAAACGCTTAAAAAAACAGCGGGCAG GACAGAGAGGAGATACTCAA
Downstream 100 bases:
>100_bases GAATTCGACATGACGCAATTTATCAATGGCCAGTGGCTCGCTGGCGAAGGCAAAGAGATGCAGTCAAAAAACCCCGCCAA CGGCGAGGTGATTTGGCAGG
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP ELAAGLLVSDGEQVRVLAI
Sequences:
>Translated_339_residues MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP ELAAGLLVSDGEQVRVLAI >Mature_339_residues MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYLMVLEDTQTQEVVGTCALEAA VGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGAAELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETV IAEMRGVSDENGNSPFYGWLQKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDYRATSVELMVSSDSDEVILSP ELAAGLLVSDGEQVRVLAI
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=342, Percent_Identity=45.6140350877193, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 37972; Mature: 37972
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYL CEEEEECCCCCHHHEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE MVLEDTQTQEVVGTCALEAAVGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGA EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCCCH AELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETVIAEMRGVSDENGNSPFYGWL HHHHHHHHHHCCEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL HHHHCCCEEEHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHH RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDY HHCCCEEEEEEEEECCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEE RATSVELMVSSDSDEVILSPELAAGLLVSDGEQVRVLAI EECEEEEEEECCCCCEEECCCHHCCEEECCCCEEEEEEC >Mature Secondary Structure MLIIRPIRASDFDALYRIAVESGHGFTSLPVNEDLLRRKIARSEASFQKVVETPYDEGYL CEEEEECCCCCHHHEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE MVLEDTQTQEVVGTCALEAAVGMEDAFYHYRLGTEVYHSQQINVRNEVETLTLCHDYTGA EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCCCH AELCTLFLRGAYRKDNNGRMLSRSRFLFLAQHANRFGETVIAEMRGVSDENGNSPFYGWL HHHHHHHHHHCCEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QKHFLGIDFVEADYLSGLGRKAFMAEMMPRNPVYVCLLPEEAQKVIGEVHTNTRPALSLL HHHHCCCEEEHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHH RAEGFRCRGYVDIFDGGPTVECNLQDIRGVRESRLLTVRIGEMPASDDSFILSNTQLVDY HHCCCEEEEEEEEECCCCEEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEE RATSVELMVSSDSDEVILSPELAAGLLVSDGEQVRVLAI EECEEEEEEECCCCCEEECCCHHCCEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA