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The map label for this gene is napH [H]

Identifier: 119776117

GI number: 119776117

Start: 3556626

End: 3557537

Strand: Direct

Name: napH [H]

Synonym: Sama_2985

Alternate gene names: 119776117

Gene position: 3556626-3557537 (Clockwise)

Preceding gene: 119776116

Following gene: 119776118

Centisome position: 82.59

GC content: 60.09

Gene sequence:

>912_bases
ATGAGCACTGCCAAGGTAAACCAAGCACGCTTTGCCGAGGATGCCATCCGCGAACTCGGTTGGTGGAAGGCGCATCGCTT
TTTGCTGCTGCGCCGCGCCACACAACTGACCGTGCTGGCGCTGTTTGCCATTGGCCCCCTGTTGGGGCTGTGGCTGCTCA
AGGGCAACCTGTCGTCCAGCTTGCTGCTCGATACCATCCCCATGGCCGACCCGCTGGTCACACTGCAGCTGCTTACCGCT
GGCCATGTGCCAGAGGCCAGCCTGCTGATTGGCGCTGCCATTATCGGCCTGTTTTACGCGCTGATGGGGGGACGGGTGTT
CTGCAGCTGGGTGTGTCCGGTGAACATGGTGACGGATTTGGCGGCCTACCTTCGCAGACGCTTTGCCCTGCCAAGAACCC
CGGAGCTGCCGCGCCAGCTGCGCTACTTTATGTTGGCGCTGGTGCTGCTGTTGCCTGTGGTCACAGGCATCGCCGCCTGG
GAGTGGCTCAATCCCGTGCCCGTGCTTTACCGCGCCGTGCTGTTTGGCGCTGGTGCCGGGCTTGGGCTGCTTGTCGCCAT
CTTCCTTGCGGATCTCCTGATAGTCGAGCGGCTGTGGTGCTCGCACCTGTGCCCCAGTGGCGCCCTGTTTGCCCTCCTTG
GCAAGTTAAGCCCGGTGAAGATGACCGCGGTGAACGCCAAAGACTGCAACAACTGCATGGATTGCTTCGTGGTCTGCCCC
GAGCGTCAGGTGCTCAAACCTGCCCTCAAGGGCGCAAATCCGATGATTACAGACTCGGACTGCACCCAGTGCGGCCGCTG
TATCGATGTGTGTGCCAAAGGCGTATTCCAGTACAAGAACCGATTTACATTCCAGGATAATCCTTTACAGAAAAGCCCCC
GAATTGCCAAGAAGGCGGAGAACGAACAATGA

Upstream 100 bases:

>100_bases
TACTGCCACCCCATATCGCCATGGGTAAAACCGCCGATCACGACACCTATTTCAATACCGAAAGCACCACCCTTGAAATG
CTGAACAAGGGGTTTGAACT

Downstream 100 bases:

>100_bases
AAAGAGTACTCACCTTAGCTGCGCTGTTTGTCGCCATCGCCGGTTGCAGCGGCCAGAACGCCCCGGTGAACAATGAGCCG
GTCAATGTCCAATCACTGGC

Product: quinol dehydrogenase membrane component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSSLLLDTIPMADPLVTLQLLTA
GHVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDLAAYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAW
EWLNPVPVLYRAVLFGAGAGLGLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCP
ERQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRFTFQDNPLQKSPRIAKKAENEQ

Sequences:

>Translated_303_residues
MSTAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSSLLLDTIPMADPLVTLQLLTA
GHVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDLAAYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAW
EWLNPVPVLYRAVLFGAGAGLGLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCP
ERQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRFTFQDNPLQKSPRIAKKAENEQ
>Mature_302_residues
STAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSSLLLDTIPMADPLVTLQLLTAG
HVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDLAAYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAWE
WLNPVPVLYRAVLFGAGAGLGLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCPE
RQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRFTFQDNPLQKSPRIAKKAENEQ

Specific function: Involved in electron transfer [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=280, Percent_Identity=48.9285714285714, Blast_Score=280, Evalue=6e-77,
Organism=Escherichia coli, GI1787226, Length=265, Percent_Identity=26.7924528301887, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33382; Mature: 33251

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLLDTIPMADPLVTLQLLTAGHVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDL
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHCHHHHHHHH
AAYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAWEWLNPVPVLYRAVLFGAGAG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
LGLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCC
ERQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRFTFQDNPLQKSPRIAKKAE
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
NEQ
CCC
>Mature Secondary Structure 
STAKVNQARFAEDAIRELGWWKAHRFLLLRRATQLTVLALFAIGPLLGLWLLKGNLSSS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLLDTIPMADPLVTLQLLTAGHVPEASLLIGAAIIGLFYALMGGRVFCSWVCPVNMVTDL
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHCHHHHHHHH
AAYLRRRFALPRTPELPRQLRYFMLALVLLLPVVTGIAAWEWLNPVPVLYRAVLFGAGAG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
LGLLVAIFLADLLIVERLWCSHLCPSGALFALLGKLSPVKMTAVNAKDCNNCMDCFVVCP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCC
ERQVLKPALKGANPMITDSDCTQCGRCIDVCAKGVFQYKNRFTFQDNPLQKSPRIAKKAE
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
NEQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]