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The map label for this gene is ybiF [C]

Identifier: 119776048

GI number: 119776048

Start: 3465462

End: 3466355

Strand: Direct

Name: ybiF [C]

Synonym: Sama_2916

Alternate gene names: 119776048

Gene position: 3465462-3466355 (Clockwise)

Preceding gene: 119776047

Following gene: 119776049

Centisome position: 80.48

GC content: 55.7

Gene sequence:

>894_bases
ATGCAAAGCGGTTTTTATTTGTTGGCAGCCCTGTCAGCCATTCTCATGGGTACCATTGGCATCATTGCCCGCTTTGGCGA
ACTGGATGCCGCCATGCTGACCTTTTACCGGCTGGGGCTGGGCGCCCTTATCCTGATGCTGTTTTTGCTGTTTCGCCGCG
AAACGGCAAGGCTATGGGTAAAACCGCACTGGGGCACAGTGGCCGGTGGCGTATTGCTGGCGACCTTTATTCTGTGTTTT
CTCAAAGCCATAGAAACCATTCCCATGTCCCTCGCCATTATGTTGGTGTATCTTGCTCCGGCAGTGGCTGCCATAGGCGC
GCATTTTTTGTTTGGGGAGCGTTTGGGGGCAGCGGCTTTTGGTCTGATTTTGCTGGCCTTTTTCGGTTTTGCCATGCTTC
AGGAGTTCAACTTGGATATGGCTGGCGCCGAAGCCCTCGGCATGAGCTATGCGCTGGGCTGTTTGCTGGCCTACACCGCC
TTTATCCTCATCAATAAAAAAATTCCGCCCGCCAGCGATCCCTACGCCAAAACCTGGGTACAGCTGGCCGTGGGTGCCCT
GGTGACACTGCCCATGGTTTGGGGCGACCCCTTGCCCAACGCCAGTGAATGGTTCTGGCTGATGATTGCCGCCGTCTTCC
CCGGCTTTTTAGCCATCCTCTTTGCGGTAAAATCCATTACCGCGCTGCCGGCCAAGATGTTCGGCACCCTGGCCTACCTT
GAACCTCTGGTCGTGGTATTAACCGGTTATCTGCTGTTTAACGAGCCCATGTCAGCCCTTAAATGGGGTGGCTGCGCCCT
TATCCTGCTGTCGGGTATTGCCCAGGTGCAACTGGCAAATGCCGCCAACGCCCGCGCTCAGGCTGGCAATGGCAGGCCCC
TTAAGGTAAGTTAA

Upstream 100 bases:

>100_bases
CTAAAATCCAGCACATTTCCCGGGGCACACATCTTGTGGCGCCCCGGGGGAATGGCTATCTTGTCTGCCCCTGTCCTGCA
TCCCTGTCGGAGCCCGTACA

Downstream 100 bases:

>100_bases
GCGCCTAAAAATAAGCCGCATTGCGGTAACTTGAAGGAAGTCTCACGTGAAGTTCTTAAGCCAAGCCTGGGTGGCCGTTG
CCGCTATCACCCTGGTGTCC

Product: DMT family permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQSGFYLLAALSAILMGTIGIIARFGELDAAMLTFYRLGLGALILMLFLLFRRETARLWVKPHWGTVAGGVLLATFILCF
LKAIETIPMSLAIMLVYLAPAVAAIGAHFLFGERLGAAAFGLILLAFFGFAMLQEFNLDMAGAEALGMSYALGCLLAYTA
FILINKKIPPASDPYAKTWVQLAVGALVTLPMVWGDPLPNASEWFWLMIAAVFPGFLAILFAVKSITALPAKMFGTLAYL
EPLVVVLTGYLLFNEPMSALKWGGCALILLSGIAQVQLANAANARAQAGNGRPLKVS

Sequences:

>Translated_297_residues
MQSGFYLLAALSAILMGTIGIIARFGELDAAMLTFYRLGLGALILMLFLLFRRETARLWVKPHWGTVAGGVLLATFILCF
LKAIETIPMSLAIMLVYLAPAVAAIGAHFLFGERLGAAAFGLILLAFFGFAMLQEFNLDMAGAEALGMSYALGCLLAYTA
FILINKKIPPASDPYAKTWVQLAVGALVTLPMVWGDPLPNASEWFWLMIAAVFPGFLAILFAVKSITALPAKMFGTLAYL
EPLVVVLTGYLLFNEPMSALKWGGCALILLSGIAQVQLANAANARAQAGNGRPLKVS
>Mature_297_residues
MQSGFYLLAALSAILMGTIGIIARFGELDAAMLTFYRLGLGALILMLFLLFRRETARLWVKPHWGTVAGGVLLATFILCF
LKAIETIPMSLAIMLVYLAPAVAAIGAHFLFGERLGAAAFGLILLAFFGFAMLQEFNLDMAGAEALGMSYALGCLLAYTA
FILINKKIPPASDPYAKTWVQLAVGALVTLPMVWGDPLPNASEWFWLMIAAVFPGFLAILFAVKSITALPAKMFGTLAYL
EPLVVVLTGYLLFNEPMSALKWGGCALILLSGIAQVQLANAANARAQAGNGRPLKVS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31801; Mature: 31801

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGFYLLAALSAILMGTIGIIARFGELDAAMLTFYRLGLGALILMLFLLFRRETARLWV
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
KPHWGTVAGGVLLATFILCFLKAIETIPMSLAIMLVYLAPAVAAIGAHFLFGERLGAAAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLILLAFFGFAMLQEFNLDMAGAEALGMSYALGCLLAYTAFILINKKIPPASDPYAKTWV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QLAVGALVTLPMVWGDPLPNASEWFWLMIAAVFPGFLAILFAVKSITALPAKMFGTLAYL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPLVVVLTGYLLFNEPMSALKWGGCALILLSGIAQVQLANAANARAQAGNGRPLKVS
HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSGFYLLAALSAILMGTIGIIARFGELDAAMLTFYRLGLGALILMLFLLFRRETARLWV
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
KPHWGTVAGGVLLATFILCFLKAIETIPMSLAIMLVYLAPAVAAIGAHFLFGERLGAAAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLILLAFFGFAMLQEFNLDMAGAEALGMSYALGCLLAYTAFILINKKIPPASDPYAKTWV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QLAVGALVTLPMVWGDPLPNASEWFWLMIAAVFPGFLAILFAVKSITALPAKMFGTLAYL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPLVVVLTGYLLFNEPMSALKWGGCALILLSGIAQVQLANAANARAQAGNGRPLKVS
HHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA