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The map label for this gene is mipA [H]

Identifier: 119775930

GI number: 119775930

Start: 3338415

End: 3339299

Strand: Direct

Name: mipA [H]

Synonym: Sama_2798

Alternate gene names: 119775930

Gene position: 3338415-3339299 (Clockwise)

Preceding gene: 119775929

Following gene: 119775931

Centisome position: 77.53

GC content: 51.3

Gene sequence:

>885_bases
ATGGAACCCCAGATTGCCACCCAAATGAAGTCATCCTTTTTTGGTTTTTTACTCAGTGTCTTGCTCCTGTCACCCTCCAT
GGTGATGGCGCAGTGTGACGACACCACAGACTGCATCGAAAAAGGCAGTTGGGATCTGGGCATTGCCTTTGGCTATGGCC
AAAGAACCAATCCGCTTAAAGATTACGAAGACATCCCCATCTATGTGCTGCCCACCATCGCCTATTATGGCGACAGCTGG
TTTTTTGATAATGGCGCCATAGGTTACACCCTGACGGAGCAAGAGCGCTTTACTGTCAATTTGATCACTGGCTTCTCCAG
TGACAGGGCCTTTTTCTATCGCTGGGATCCTTCCAATATCTTCCTGGCCGGTACCTCCCGTGGGTTCAGAGAGGCAGAGC
TGAGCGGTATCACCAGTTTTGCGACCCTGGATACCATAGGCGAGCTGGAGTCACGTAACTTTACATACCTCGGCGGTATT
GAGGCCTATGTCTACAACCGTTTTGGCACCTTACGGCTGGCCCTGCTCCATGATCTCCTGAACGTGCATCAGGGCACTGA
AGGCCAAATCAAGTGGAACTACCATTGGGGTCATAAAGAGTTAAGTGTTGATTTTGCGGTATTCTTTGACTGGAAGAGTC
AGGAAGTCGTTAACTATTACTATGGCGTACGCCCATCGGAAAGTGCATACTGGCATGAGCATTACCGCACAGAAAACGGC
TGGAACCGTGGGCTCGAACTCACAGCCCGTTACAGCCTAACACCTGCATGGGAACTCCTGATGACGGCTCGCTACACCCA
ACTCGCCGATACCATAGCGCAAAGCCCCCTATTGGACGAAGACGACAGCTACGCCTACCTGATTGGCGCAGCCTATAGGT
TCTGA

Upstream 100 bases:

>100_bases
CGCTGCGTATTGGGCAAAGTACAAGTATCAAATTGCAACAGTGAAACCTTGGCCACTGCTGCACCGACATTTACATGCTA
ATCTGTTGCAACCTTTGTTA

Downstream 100 bases:

>100_bases
TGCCGTTGAAGACCTGTCGTCGACTGTTACTGCTGCCTTTGATAAGCCTGCTGGGACTTCCTGCGGCTAAGGCCGGTGAC
ACGTCCAATTCTTTCGAGGT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEPQIATQMKSSFFGFLLSVLLLSPSMVMAQCDDTTDCIEKGSWDLGIAFGYGQRTNPLKDYEDIPIYVLPTIAYYGDSW
FFDNGAIGYTLTEQERFTVNLITGFSSDRAFFYRWDPSNIFLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGI
EAYVYNRFGTLRLALLHDLLNVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYYYGVRPSESAYWHEHYRTENG
WNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLDEDDSYAYLIGAAYRF

Sequences:

>Translated_294_residues
MEPQIATQMKSSFFGFLLSVLLLSPSMVMAQCDDTTDCIEKGSWDLGIAFGYGQRTNPLKDYEDIPIYVLPTIAYYGDSW
FFDNGAIGYTLTEQERFTVNLITGFSSDRAFFYRWDPSNIFLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGI
EAYVYNRFGTLRLALLHDLLNVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYYYGVRPSESAYWHEHYRTENG
WNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLDEDDSYAYLIGAAYRF
>Mature_294_residues
MEPQIATQMKSSFFGFLLSVLLLSPSMVMAQCDDTTDCIEKGSWDLGIAFGYGQRTNPLKDYEDIPIYVLPTIAYYGDSW
FFDNGAIGYTLTEQERFTVNLITGFSSDRAFFYRWDPSNIFLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGI
EAYVYNRFGTLRLALLHDLLNVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYYYGVRPSESAYWHEHYRTENG
WNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLDEDDSYAYLIGAAYRF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=255, Percent_Identity=27.843137254902, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790010, Length=251, Percent_Identity=23.1075697211155, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 33803; Mature: 33803

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPQIATQMKSSFFGFLLSVLLLSPSMVMAQCDDTTDCIEKGSWDLGIAFGYGQRTNPLK
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCEEEEEEECCCCCCCCC
DYEDIPIYVLPTIAYYGDSWFFDNGAIGYTLTEQERFTVNLITGFSSDRAFFYRWDPSNI
CCCCCCEEEEEEEEECCCCEEECCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCE
FLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGIEAYVYNRFGTLRLALLHDLL
EEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHH
NVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYYYGVRPSESAYWHEHYRTENG
HHCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCC
WNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLDEDDSYAYLIGAAYRF
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MEPQIATQMKSSFFGFLLSVLLLSPSMVMAQCDDTTDCIEKGSWDLGIAFGYGQRTNPLK
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCEEEEEEECCCCCCCCC
DYEDIPIYVLPTIAYYGDSWFFDNGAIGYTLTEQERFTVNLITGFSSDRAFFYRWDPSNI
CCCCCCEEEEEEEEECCCCEEECCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCE
FLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGIEAYVYNRFGTLRLALLHDLL
EEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHH
NVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYYYGVRPSESAYWHEHYRTENG
HHCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCC
WNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLDEDDSYAYLIGAAYRF
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]