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The map label for this gene is 119775878

Identifier: 119775878

GI number: 119775878

Start: 3283708

End: 3285927

Strand: Direct

Name: 119775878

Synonym: Sama_2746

Alternate gene names: NA

Gene position: 3283708-3285927 (Clockwise)

Preceding gene: 119775877

Following gene: 119775882

Centisome position: 76.26

GC content: 56.85

Gene sequence:

>2220_bases
ATGCTCAAACCCAACACCGGATTATCGTCGCTTTCCTCCCTGCTGACCGATGAACAAAGCGTTCGCTGGTCGCATCAACG
TATGCTGGCCATTGCCAGTCAGTTGGCGATGCTGGTGATAAGCGTAGTGTTGGTGATTAATGTCATCATCACCCTGGGTG
AGCGCAGATTGCAGCAGGAATGGGCGACCCAAAGATACAGCGAGCTCCAGTCTGTCGGCACCATGATTGCTGACAAGGTC
ACCTTCCAGCAGTTCCGTACCCAAACCTTTGCCCGTGGCGAACTGCTGCGCCAGTATCTCGACAGCGGCGATGAGAGCCT
GAAGGAAAAGCTGCTGCTGCAATGGACCGGGCTGCAAAAGAACATGCCCGAACTCATGGGTATTGCCCTGTTCAATGCCA
ACGGCGAGTTTCTGTTTGCATCAACCGATATATTCGGACGCCAAACCCTGCCGCCATCACTGCTGGGCGGTGCCCGCAAC
ATGGGTGGCAACGAAATCTACAGCTCCCCCATGGAGTTCCTGTCAGTCAACGGCGAGCTCGAACCCTATATGTATCAGCT
GGCCTGGCTTGAAAACCCCGATCAGACCGTGCGGGGCTATCTGGTGACTTATAACTCCATGCTGCGCACCCTGGACATGG
TCAAACCCGCCCTCAGTGCCACTCAGCAACCCATGATGATGTTCGATACCCAGGGACTCATGTATGCCGGCCCCAGCGAT
GCCCCCCTGCCCAGGCTGCCCGAAGGTTTGAGTGGCAGTCTGCGTCAGAGTTACCCCGCTCTGTGGCGACAAATGGCCAT
GAGCAACTTTGGCCAGTTCCACGGCGATGACGCCACCTTTGTGTATCTGAAAGTGGACCTCACCACCCAGTATGAAACCC
GCCGTGAATATTTTTTGGTGTCTTACATCCGCAACGATGACATTGCCTCCCGCTTCTCCCAGTGGCAGACCATCCTGGTC
ATAGGCGCCATCATACTGACACTGCTGGCGGCGGCCGTAGTCATACTCACCCACCTTTACCGCCTCGAGCAGCGCGCCCG
TCACAACAGCATCCAACTGGCAGCCGATCTCTTTACCGGCGAAGAAGGTCAGCTGCTGGTGAATGATAAGGGCCGGGTTC
TGAGTGCCAACCCCAAGGCTGGCAGCTTGTTGAATCTTGCGGCCAACCAACTGACAGACCGCAGTCTGCAGCGTTGTTTG
CAGCTGGATGATGAAAACTTCGAGAAAATTATTGCCACCGCCAAGGCCAAGGGAGAATGGCGCGGAGAAGTGAGCCTGGA
TGAACTTCCCGGGGCCGTGCTCCGGGTGGTGCTGCGTTACACCCGCGCCAACACAGAACGCCAGCGCTATTTCCTGGTTA
GCCTCAATGACATCAGTGAGCTGGCCCAGAGCCGCCGCGAAGAATCACTGCACAGACTGTTGGCCGACAGCGCCGTGGCC
ACGGCCCTGACCCGGGCAGACGGTACCCTGCTGAAATTCAACAGCGCCTTCGAACAGTTACTGGAATTCAACGAGCCCCT
CGGTGCCAATCTGGCGGATATTCTGGAAAATGACCTGGGTAACCAATGGCCACGCATCACGCAAATGGTGGCCATGCAAG
GCAGCTGGCAGGGGCAAATTCTGTGCACCAACAATGCCAGCACCTGTTTGCAGGCAACCCTCAAAGGCCATCTCGACGAT
GAGGGCGATATTGAGTATTTGGTGTGTACCCTGGAGCAAGCCAGCAGCCGCAATCGCGGCCGTGAGAACAGCCAGCTCAT
CCCCAACCGGAGCACCATCCTGGCGAATCTGGAAGACCTGGAACGCTACTACGATGCCCTGGGCGAGCAAAGCCGCAATC
ACTCCTGCCTGATGCTGATGGACATTAGCCCTGCCGGTATGCTCAGCCATATGAGCGATATTGGCCAGCTGGAAAAGCGC
CAGGAGGAGGTTGAGACCTTGCTGCTCAAAGAGCTGCCGTCCAATTCACAAATTTCCCAGTGGCAGCTGGGCAAGCTGGT
GGTCATACTGCCGGGTACCGACAGCAATGCCGCCCATAAGTATGCAGTGGATGCGCTGGACTCACTCAACAGCCTGGGGC
TGGGCGAAGGTATCTCCATTGGCATTGCGGCCCATCAGTCCGGGCAAAACCTCGAAGCCTTTATCAGCCACGCCGAAATT
GCCCTCAAGCGCGCCAAACAAACCGGCGATCAGAAGATCTGTCAGGCTTTTACCCGCTGA

Upstream 100 bases:

>100_bases
ATGGGATAGGTTTGTCCCGTCAAACTGAGGGAGCAGGCCTGTACCGACGGGGGAATCGTGTTAACATGATGCCCACTTTT
AGCCCACATTTACCGCTCGC

Downstream 100 bases:

>100_bases
CGCCCAGCAGCTGTTCCGGCAGGGATTTTTCACTGACGCTGATAATCCCACTGCGGTTTAAGGTTACCTTGTATCTGGCA
TAGCGGGGGGCCTTGCGTCC

Product: sensory box protein

Products: NA

Alternate protein names: Diguanylate Cyclase; PAS/PAC Sensor Protein

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MLKPNTGLSSLSSLLTDEQSVRWSHQRMLAIASQLAMLVISVVLVINVIITLGERRLQQEWATQRYSELQSVGTMIADKV
TFQQFRTQTFARGELLRQYLDSGDESLKEKLLLQWTGLQKNMPELMGIALFNANGEFLFASTDIFGRQTLPPSLLGGARN
MGGNEIYSSPMEFLSVNGELEPYMYQLAWLENPDQTVRGYLVTYNSMLRTLDMVKPALSATQQPMMMFDTQGLMYAGPSD
APLPRLPEGLSGSLRQSYPALWRQMAMSNFGQFHGDDATFVYLKVDLTTQYETRREYFLVSYIRNDDIASRFSQWQTILV
IGAIILTLLAAAVVILTHLYRLEQRARHNSIQLAADLFTGEEGQLLVNDKGRVLSANPKAGSLLNLAANQLTDRSLQRCL
QLDDENFEKIIATAKAKGEWRGEVSLDELPGAVLRVVLRYTRANTERQRYFLVSLNDISELAQSRREESLHRLLADSAVA
TALTRADGTLLKFNSAFEQLLEFNEPLGANLADILENDLGNQWPRITQMVAMQGSWQGQILCTNNASTCLQATLKGHLDD
EGDIEYLVCTLEQASSRNRGRENSQLIPNRSTILANLEDLERYYDALGEQSRNHSCLMLMDISPAGMLSHMSDIGQLEKR
QEEVETLLLKELPSNSQISQWQLGKLVVILPGTDSNAAHKYAVDALDSLNSLGLGEGISIGIAAHQSGQNLEAFISHAEI
ALKRAKQTGDQKICQAFTR

Sequences:

>Translated_739_residues
MLKPNTGLSSLSSLLTDEQSVRWSHQRMLAIASQLAMLVISVVLVINVIITLGERRLQQEWATQRYSELQSVGTMIADKV
TFQQFRTQTFARGELLRQYLDSGDESLKEKLLLQWTGLQKNMPELMGIALFNANGEFLFASTDIFGRQTLPPSLLGGARN
MGGNEIYSSPMEFLSVNGELEPYMYQLAWLENPDQTVRGYLVTYNSMLRTLDMVKPALSATQQPMMMFDTQGLMYAGPSD
APLPRLPEGLSGSLRQSYPALWRQMAMSNFGQFHGDDATFVYLKVDLTTQYETRREYFLVSYIRNDDIASRFSQWQTILV
IGAIILTLLAAAVVILTHLYRLEQRARHNSIQLAADLFTGEEGQLLVNDKGRVLSANPKAGSLLNLAANQLTDRSLQRCL
QLDDENFEKIIATAKAKGEWRGEVSLDELPGAVLRVVLRYTRANTERQRYFLVSLNDISELAQSRREESLHRLLADSAVA
TALTRADGTLLKFNSAFEQLLEFNEPLGANLADILENDLGNQWPRITQMVAMQGSWQGQILCTNNASTCLQATLKGHLDD
EGDIEYLVCTLEQASSRNRGRENSQLIPNRSTILANLEDLERYYDALGEQSRNHSCLMLMDISPAGMLSHMSDIGQLEKR
QEEVETLLLKELPSNSQISQWQLGKLVVILPGTDSNAAHKYAVDALDSLNSLGLGEGISIGIAAHQSGQNLEAFISHAEI
ALKRAKQTGDQKICQAFTR
>Mature_739_residues
MLKPNTGLSSLSSLLTDEQSVRWSHQRMLAIASQLAMLVISVVLVINVIITLGERRLQQEWATQRYSELQSVGTMIADKV
TFQQFRTQTFARGELLRQYLDSGDESLKEKLLLQWTGLQKNMPELMGIALFNANGEFLFASTDIFGRQTLPPSLLGGARN
MGGNEIYSSPMEFLSVNGELEPYMYQLAWLENPDQTVRGYLVTYNSMLRTLDMVKPALSATQQPMMMFDTQGLMYAGPSD
APLPRLPEGLSGSLRQSYPALWRQMAMSNFGQFHGDDATFVYLKVDLTTQYETRREYFLVSYIRNDDIASRFSQWQTILV
IGAIILTLLAAAVVILTHLYRLEQRARHNSIQLAADLFTGEEGQLLVNDKGRVLSANPKAGSLLNLAANQLTDRSLQRCL
QLDDENFEKIIATAKAKGEWRGEVSLDELPGAVLRVVLRYTRANTERQRYFLVSLNDISELAQSRREESLHRLLADSAVA
TALTRADGTLLKFNSAFEQLLEFNEPLGANLADILENDLGNQWPRITQMVAMQGSWQGQILCTNNASTCLQATLKGHLDD
EGDIEYLVCTLEQASSRNRGRENSQLIPNRSTILANLEDLERYYDALGEQSRNHSCLMLMDISPAGMLSHMSDIGQLEKR
QEEVETLLLKELPSNSQISQWQLGKLVVILPGTDSNAAHKYAVDALDSLNSLGLGEGISIGIAAHQSGQNLEAFISHAEI
ALKRAKQTGDQKICQAFTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82545; Mature: 82545

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPNTGLSSLSSLLTDEQSVRWSHQRMLAIASQLAMLVISVVLVINVIITLGERRLQQE
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WATQRYSELQSVGTMIADKVTFQQFRTQTFARGELLRQYLDSGDESLKEKLLLQWTGLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
NMPELMGIALFNANGEFLFASTDIFGRQTLPPSLLGGARNMGGNEIYSSPMEFLSVNGEL
CCHHHHEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHCCHHHHCCCCCC
EPYMYQLAWLENPDQTVRGYLVTYNSMLRTLDMVKPALSATQQPMMMFDTQGLMYAGPSD
CHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCC
APLPRLPEGLSGSLRQSYPALWRQMAMSNFGQFHGDDATFVYLKVDLTTQYETRREYFLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECHHHHHHEEEE
SYIRNDDIASRFSQWQTILVIGAIILTLLAAAVVILTHLYRLEQRARHNSIQLAADLFTG
EHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHCC
EEGQLLVNDKGRVLSANPKAGSLLNLAANQLTDRSLQRCLQLDDENFEKIIATAKAKGEW
CCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
RGEVSLDELPGAVLRVVLRYTRANTERQRYFLVSLNDISELAQSRREESLHRLLADSAVA
CCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
TALTRADGTLLKFNSAFEQLLEFNEPLGANLADILENDLGNQWPRITQMVAMQGSWQGQI
HHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE
LCTNNASTCLQATLKGHLDDEGDIEYLVCTLEQASSRNRGRENSQLIPNRSTILANLEDL
EEECCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ERYYDALGEQSRNHSCLMLMDISPAGMLSHMSDIGQLEKRQEEVETLLLKELPSNSQISQ
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WQLGKLVVILPGTDSNAAHKYAVDALDSLNSLGLGEGISIGIAAHQSGQNLEAFISHAEI
EECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHH
ALKRAKQTGDQKICQAFTR
HHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MLKPNTGLSSLSSLLTDEQSVRWSHQRMLAIASQLAMLVISVVLVINVIITLGERRLQQE
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WATQRYSELQSVGTMIADKVTFQQFRTQTFARGELLRQYLDSGDESLKEKLLLQWTGLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
NMPELMGIALFNANGEFLFASTDIFGRQTLPPSLLGGARNMGGNEIYSSPMEFLSVNGEL
CCHHHHEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHCCHHHHCCCCCC
EPYMYQLAWLENPDQTVRGYLVTYNSMLRTLDMVKPALSATQQPMMMFDTQGLMYAGPSD
CHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCC
APLPRLPEGLSGSLRQSYPALWRQMAMSNFGQFHGDDATFVYLKVDLTTQYETRREYFLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECHHHHHHEEEE
SYIRNDDIASRFSQWQTILVIGAIILTLLAAAVVILTHLYRLEQRARHNSIQLAADLFTG
EHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHCC
EEGQLLVNDKGRVLSANPKAGSLLNLAANQLTDRSLQRCLQLDDENFEKIIATAKAKGEW
CCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
RGEVSLDELPGAVLRVVLRYTRANTERQRYFLVSLNDISELAQSRREESLHRLLADSAVA
CCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
TALTRADGTLLKFNSAFEQLLEFNEPLGANLADILENDLGNQWPRITQMVAMQGSWQGQI
HHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE
LCTNNASTCLQATLKGHLDDEGDIEYLVCTLEQASSRNRGRENSQLIPNRSTILANLEDL
EEECCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ERYYDALGEQSRNHSCLMLMDISPAGMLSHMSDIGQLEKRQEEVETLLLKELPSNSQISQ
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WQLGKLVVILPGTDSNAAHKYAVDALDSLNSLGLGEGISIGIAAHQSGQNLEAFISHAEI
EECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHH
ALKRAKQTGDQKICQAFTR
HHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA