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The map label for this gene is 119775882

Identifier: 119775882

GI number: 119775882

Start: 3289078

End: 3289896

Strand: Direct

Name: 119775882

Synonym: Sama_2750

Alternate gene names: NA

Gene position: 3289078-3289896 (Clockwise)

Preceding gene: 119775878

Following gene: 119775883

Centisome position: 76.38

GC content: 54.46

Gene sequence:

>819_bases
ATGAAAATCGACAGACGACAGGCGCTCGGACAAATTATCGGACTGGGCAGTGCAGCAGGCCTTGGCCTGGTCAGTACTTC
ACTGATGGCGGCAACCGACGAGAACGGTAACTATCAGCTCGCCCTCGGTGAAAAACTCAAATATGTACCGCTGGATCCCA
TGGCCACCGCCAAGCTGGCCTATGAAACCGGTGGCGGCTGTATGCACCAGGTATTCCATGCCACTGTCACCATGTTGGCC
AATTCTGCCAGTGTGGATGCCGACAAGTTCAAGTCCATTCCCACCGCACTTGCAGGTTATGGTTTTGCCGGGGTAACGGG
TCAGGGCACCCTGTGTGGTAACCTCAACGCCATTGGTATGCTGGTCAATCTTCTGGACGACATCAACGGACAGAACGCCG
CCGTGATTGGCGCTGCCTTCCGTTGGTATGAAAACACCAAACTGCCATTGGATACTGCGGAATTTATTGCCGGTATTGGC
TCTACAGCTGAAAAGACTGAACTGGTTGTCAGCTCATCGGTAGCTAACAGCGTATTGTGCCACTCCTCCATCAGTAACTG
GTCCAAGGCATCCGGCAAAACCTTCAGCCAGAAAGGCGAGCGCTGCTATCGCTTGTCTGCTTCCATGGCCTATCACCTGG
TTGAACTCCTGAACCGTGCCTACAAGGGCGAAGTCATTTCCGGTATCCCTGAAGCCAAACCTTCCGAAGAAGCCCAGCGC
TGCCAGACCTGTCACGGCAGCACAGAGACCATGGGCCCGGCGGCCAGCGTTAAAACCGACATGGAATGCACCACCTGTCA
TACCGGCCACTTCAATTAA

Upstream 100 bases:

>100_bases
CAAATCACAGTCTTCCTTTTCGTGCCCGACATACTGATGCCAAGGCCCCAGGGGCCCTTGTATCACAACACCCTTGAAGC
ACAACAAGAGGAAAAACAGC

Downstream 100 bases:

>100_bases
GGGGGCGCCATGAAACCAAGACTTATCTACCCGCTGCTTGCGACACTGCTTTTGGGTGCCTGCGGCAGCGACAATGACCC
ACAGGAGCCCATCACACCCG

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKIDRRQALGQIIGLGSAAGLGLVSTSLMAATDENGNYQLALGEKLKYVPLDPMATAKLAYETGGGCMHQVFHATVTMLA
NSASVDADKFKSIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNLLDDINGQNAAVIGAAFRWYENTKLPLDTAEFIAGIG
STAEKTELVVSSSVANSVLCHSSISNWSKASGKTFSQKGERCYRLSASMAYHLVELLNRAYKGEVISGIPEAKPSEEAQR
CQTCHGSTETMGPAASVKTDMECTTCHTGHFN

Sequences:

>Translated_272_residues
MKIDRRQALGQIIGLGSAAGLGLVSTSLMAATDENGNYQLALGEKLKYVPLDPMATAKLAYETGGGCMHQVFHATVTMLA
NSASVDADKFKSIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNLLDDINGQNAAVIGAAFRWYENTKLPLDTAEFIAGIG
STAEKTELVVSSSVANSVLCHSSISNWSKASGKTFSQKGERCYRLSASMAYHLVELLNRAYKGEVISGIPEAKPSEEAQR
CQTCHGSTETMGPAASVKTDMECTTCHTGHFN
>Mature_272_residues
MKIDRRQALGQIIGLGSAAGLGLVSTSLMAATDENGNYQLALGEKLKYVPLDPMATAKLAYETGGGCMHQVFHATVTMLA
NSASVDADKFKSIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNLLDDINGQNAAVIGAAFRWYENTKLPLDTAEFIAGIG
STAEKTELVVSSSVANSVLCHSSISNWSKASGKTFSQKGERCYRLSASMAYHLVELLNRAYKGEVISGIPEAKPSEEAQR
CQTCHGSTETMGPAASVKTDMECTTCHTGHFN

Specific function: Diheme cytochrome c which may be involved in sulfate reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010181
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09719 C_GCAxxG_C_C [H]

EC number: NA

Molecular weight: Translated: 28612; Mature: 28612

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDRRQALGQIIGLGSAAGLGLVSTSLMAATDENGNYQLALGEKLKYVPLDPMATAKLA
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCEEECCCCCCHHHEEE
YETGGGCMHQVFHATVTMLANSASVDADKFKSIPTALAGYGFAGVTGQGTLCGNLNAIGM
EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHH
LVNLLDDINGQNAAVIGAAFRWYENTKLPLDTAEFIAGIGSTAEKTELVVSSSVANSVLC
HHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HSSISNWSKASGKTFSQKGERCYRLSASMAYHLVELLNRAYKGEVISGIPEAKPSEEAQR
HHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHH
CQTCHGSTETMGPAASVKTDMECTTCHTGHFN
HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKIDRRQALGQIIGLGSAAGLGLVSTSLMAATDENGNYQLALGEKLKYVPLDPMATAKLA
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCEEECCCCCCHHHEEE
YETGGGCMHQVFHATVTMLANSASVDADKFKSIPTALAGYGFAGVTGQGTLCGNLNAIGM
EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHH
LVNLLDDINGQNAAVIGAAFRWYENTKLPLDTAEFIAGIGSTAEKTELVVSSSVANSVLC
HHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HSSISNWSKASGKTFSQKGERCYRLSASMAYHLVELLNRAYKGEVISGIPEAKPSEEAQR
HHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHH
CQTCHGSTETMGPAASVKTDMECTTCHTGHFN
HHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9346301; 1646022 [H]