The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is kcsA [H]

Identifier: 119775803

GI number: 119775803

Start: 3196235

End: 3197077

Strand: Direct

Name: kcsA [H]

Synonym: Sama_2671

Alternate gene names: 119775803

Gene position: 3196235-3197077 (Clockwise)

Preceding gene: 119775802

Following gene: 119775805

Centisome position: 74.23

GC content: 52.67

Gene sequence:

>843_bases
ATGCCAGAAGATACAAAGGTGCACGTAAAGCGCATAAAAAGCCCACAGCCGATAGAGCTGGCGATGATGTTGTTATCATT
GCTCGCGGTTATTGTGGTTCTGGTAATGACCTTTGGCCGTCTCGATGCTGAAACCTATCGACTGCTGTTTTTTATCGATA
CCGGCATTTGCTCCATCTTCCTGGTGCACTTTTTTATCGGGCTTTTCAACGCCACCAATAAATGGCACTTCATTCGGGAT
CACTGGATTGACTTTGTCGCCAGCATCCCGGCCATCGAAACCCTCAGGTTCGCCCGTCTGTTTCAAATTCTGCGGGTTAT
CCGTCTCGTTCGCATGAGCCGCTCCCTTTTGGCTCAGGTACTCAGGCAAAGACGCCAGGCAACCCTCGCCAGTCTCCTGG
TAGCACTGGTTACCATTCTGACCCTGTCCTCTGTGGCTATCTTATTGGTGGAGTCCCCTGCCGACGGTTCCAACATACTT
ACCGCAGAACAGGCCATCTGGTGGGCCATGGTCACTATTTCCACCGTGGGTTATGGCGATCATTACCCCGTCACTACCGC
AGGGCACATCGTCGGCTCCATGGTCATCGTCTGTGGCGTGAGCTTTTTCGGCATTATTTCGGGTTATATGGCGTCCGTAT
TCGTGGCGCCGGATGACGAAGAGCGCCAGGAGGCACAGGCTGAAAATATTCGCCATGAGCTGGATGCTGCGCTCAAGCGC
ATGGAAGACAATCAAGCCACCATGCTAAGAGAAATGGCCGCGCTGAAACATGCGCTAAAAGAAGCCCAAGGCGCGGCGAA
ACAGAAGGAAGACACAGACAAAGGCAACACAACCGAGCAATGA

Upstream 100 bases:

>100_bases
AGAGAGTCAGCTTGAAATTAAAAAGCGGGTACTGGAAGACTTGGTCAATTTCGTTTCTGAAGACTGAGTGACAGCCAAAT
CCAGGACTTGGGGGAGTCAG

Downstream 100 bases:

>100_bases
GCCTTTGTCGATAATCTCTTACGGCAATCCATAAAAAACGCCCGAAAATTTCGGGCGTTTTTATAGATTGGTTTGAACCA
AACTATCTGCCTTGTCGGGA

Product: ion transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MPEDTKVHVKRIKSPQPIELAMMLLSLLAVIVVLVMTFGRLDAETYRLLFFIDTGICSIFLVHFFIGLFNATNKWHFIRD
HWIDFVASIPAIETLRFARLFQILRVIRLVRMSRSLLAQVLRQRRQATLASLLVALVTILTLSSVAILLVESPADGSNIL
TAEQAIWWAMVTISTVGYGDHYPVTTAGHIVGSMVIVCGVSFFGIISGYMASVFVAPDDEERQEAQAENIRHELDAALKR
MEDNQATMLREMAALKHALKEAQGAAKQKEDTDKGNTTEQ

Sequences:

>Translated_280_residues
MPEDTKVHVKRIKSPQPIELAMMLLSLLAVIVVLVMTFGRLDAETYRLLFFIDTGICSIFLVHFFIGLFNATNKWHFIRD
HWIDFVASIPAIETLRFARLFQILRVIRLVRMSRSLLAQVLRQRRQATLASLLVALVTILTLSSVAILLVESPADGSNIL
TAEQAIWWAMVTISTVGYGDHYPVTTAGHIVGSMVIVCGVSFFGIISGYMASVFVAPDDEERQEAQAENIRHELDAALKR
MEDNQATMLREMAALKHALKEAQGAAKQKEDTDKGNTTEQ
>Mature_279_residues
PEDTKVHVKRIKSPQPIELAMMLLSLLAVIVVLVMTFGRLDAETYRLLFFIDTGICSIFLVHFFIGLFNATNKWHFIRDH
WIDFVASIPAIETLRFARLFQILRVIRLVRMSRSLLAQVLRQRRQATLASLLVALVTILTLSSVAILLVESPADGSNILT
AEQAIWWAMVTISTVGYGDHYPVTTAGHIVGSMVIVCGVSFFGIISGYMASVFVAPDDEERQEAQAENIRHELDAALKRM
EDNQATMLREMAALKHALKEAQGAAKQKEDTDKGNTTEQ

Specific function: Acts as a potassium ion channel [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the potassium channel family [H]

Homologues:

Organism=Homo sapiens, GI27436974, Length=263, Percent_Identity=23.9543726235741, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI119395748, Length=179, Percent_Identity=32.4022346368715, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI88758565, Length=187, Percent_Identity=32.0855614973262, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI26051262, Length=144, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI26051260, Length=144, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI26051266, Length=144, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI26051264, Length=144, Percent_Identity=30.5555555555556, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI4504821, Length=162, Percent_Identity=32.7160493827161, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI4826782, Length=193, Percent_Identity=30.5699481865285, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI26051268, Length=165, Percent_Identity=27.8787878787879, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI25952087, Length=261, Percent_Identity=26.4367816091954, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27436986, Length=178, Percent_Identity=30.3370786516854, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27436984, Length=178, Percent_Identity=30.3370786516854, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4504817, Length=275, Percent_Identity=26.5454545454545, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI236462242, Length=148, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI236461942, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI25952092, Length=177, Percent_Identity=31.0734463276836, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI236462079, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI28373065, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI236461719, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4826784, Length=203, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI5031819, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI25952108, Length=140, Percent_Identity=33.5714285714286, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI20070166, Length=225, Percent_Identity=27.1111111111111, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9789987, Length=232, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI26638655, Length=147, Percent_Identity=27.891156462585, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI19424136, Length=123, Percent_Identity=37.3983739837398, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI27436981, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI26638653, Length=147, Percent_Identity=27.891156462585, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI163792201, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4758630, Length=168, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4826786, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI21217561, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI24497458, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI21217563, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71989381, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71989369, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71989376, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71989361, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25147242, Length=155, Percent_Identity=34.1935483870968, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25147238, Length=155, Percent_Identity=34.1935483870968, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI25148255, Length=146, Percent_Identity=30.1369863013699, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193206869, Length=146, Percent_Identity=30.1369863013699, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994134, Length=179, Percent_Identity=28.4916201117318, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17544122, Length=175, Percent_Identity=28, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564066, Length=130, Percent_Identity=32.3076923076923, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72001307, Length=164, Percent_Identity=28.6585365853659, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI221330117, Length=150, Percent_Identity=32, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI281363095, Length=150, Percent_Identity=32, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI221330119, Length=150, Percent_Identity=32, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281363097, Length=150, Percent_Identity=32, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161084970, Length=175, Percent_Identity=29.1428571428571, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17737641, Length=175, Percent_Identity=29.1428571428571, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45555859, Length=225, Percent_Identity=27.5555555555556, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45549143, Length=225, Percent_Identity=27.5555555555556, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24642910, Length=225, Percent_Identity=27.5555555555556, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24642916, Length=225, Percent_Identity=27.5555555555556, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24642914, Length=225, Percent_Identity=27.5555555555556, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007764, Length=219, Percent_Identity=24.2009132420091, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24656294, Length=219, Percent_Identity=24.2009132420091, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281365536, Length=219, Percent_Identity=24.2009132420091, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24656289, Length=219, Percent_Identity=24.2009132420091, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221330674, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28574020, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17136468, Length=172, Percent_Identity=26.1627906976744, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003091 [H]

Pfam domain/function: PF07885 Ion_trans_2 [H]

EC number: NA

Molecular weight: Translated: 31314; Mature: 31183

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MPEDTKVHVKRIKSPQPIELAMMLLSLLAVIVVLVMTFGRLDAETYRLLFFIDTGICSIF
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHHHH
LVHFFIGLFNATNKWHFIRDHWIDFVASIPAIETLRFARLFQILRVIRLVRMSRSLLAQV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQRRQATLASLLVALVTILTLSSVAILLVESPADGSNILTAEQAIWWAMVTISTVGYGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
HYPVTTAGHIVGSMVIVCGVSFFGIISGYMASVFVAPDDEERQEAQAENIRHELDAALKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH
MEDNQATMLREMAALKHALKEAQGAAKQKEDTDKGNTTEQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PEDTKVHVKRIKSPQPIELAMMLLSLLAVIVVLVMTFGRLDAETYRLLFFIDTGICSIF
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHHHH
LVHFFIGLFNATNKWHFIRDHWIDFVASIPAIETLRFARLFQILRVIRLVRMSRSLLAQV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQRRQATLASLLVALVTILTLSSVAILLVESPADGSNILTAEQAIWWAMVTISTVGYGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
HYPVTTAGHIVGSMVIVCGVSFFGIISGYMASVFVAPDDEERQEAQAENIRHELDAALKR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH
MEDNQATMLREMAALKHALKEAQGAAKQKEDTDKGNTTEQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]