The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119775796

Identifier: 119775796

GI number: 119775796

Start: 3190258

End: 3191235

Strand: Direct

Name: 119775796

Synonym: Sama_2664

Alternate gene names: NA

Gene position: 3190258-3191235 (Clockwise)

Preceding gene: 119775794

Following gene: 119775797

Centisome position: 74.09

GC content: 58.08

Gene sequence:

>978_bases
ATGGCAGGATGGCTAAAACGCATCTTTCTCCCGCTGGGAGCTGTGATGCTGATGCTTGGCCTGGCAGGCTGTGGCGACGA
TGGCGCAGCCCAGCAGGCTAAAGAAATTGACAAATACCTCACGCTCACTGAGAGCCGTATCAATACGCTTGGAGGTATGC
TGGATAAGGGGGAAATCCGCAATGCGACCCTGATTGCCCAGTATGCCGAGCGACTCAAGTCTCAGGATGCATCTTTATCT
CCCATCATTGACGCCCTGTCCCAGGATGCCGCCCGGGGCCCTCTGTATCAGAGCCTGGTCAGACGCCGCAGTGACGCGCT
TGCTCCGGTCAACTTTGTCGATGAAGACATGCGCCTTGCGGAGCTGGAAAATCTCTATCAGGCGGCCGACCCTATTCTGT
ATAACGACATGCTGTCAGATCCCCTGAATGCGCTGGCCGACATGTCGAAAGGCACCCTGCCCCGCATGAATGCCATCAGC
CGCGAAGCCGAGCTTGCCGCCAATGGCGAAGACTTCGGGCCGGGTAGTCAGCTCGTCGGCAACCCCACATACGGCCAGTG
GCAAACCGGTAGCGATGGCACCTCGTTCTGGGCCTGGTATGGCATGTATGCCATGTTCTCCAACCTGTTCCACCGGCCAG
TTTATTACGATACCTGGTCAGGCGGTCGTCACTACAGCTATTACAACGATGTGGGGCGCTACCGCTACAGCTCTCCAAGG
GATTTGGCACGCCAGCAGCAGGTCTTTACCCAGGCGAAAAAGCGCTTTGATAGCCAGGGGAAGCGATTTGACAGCCCGTA
CGCCAAAACCCGCAGCGGTGCCAGTGGGCTATCACGCCAAAGCCAACAGGCCCCCAGCGTGGCCCAGGCCGCCAAGGCCC
GTACCGAAAAACAGAAATTCCGCTCCAACTATGCCAAGGACAGCAGTTTTCGCGATGCCAAAAACCGCACCAGCCGCAGC
ACCCGACGTGGCAAGTGA

Upstream 100 bases:

>100_bases
CTCTGGGGATGACCTATGGGTTAACCCGATAATATTCCCTGAATTTTTTAATGCACTGCCCAGGACTTTCCCCAGCGGTG
CAGGGATTAACGGAGTGAAA

Downstream 100 bases:

>100_bases
GCCCAGAAATTAAGGATCTGATGATGACACTGTTACAAGACTATGGCCTGACACAAGAACTGTTGCTGATCCTGGCCATC
GACCTCACCATCGCCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MAGWLKRIFLPLGAVMLMLGLAGCGDDGAAQQAKEIDKYLTLTESRINTLGGMLDKGEIRNATLIAQYAERLKSQDASLS
PIIDALSQDAARGPLYQSLVRRRSDALAPVNFVDEDMRLAELENLYQAADPILYNDMLSDPLNALADMSKGTLPRMNAIS
REAELAANGEDFGPGSQLVGNPTYGQWQTGSDGTSFWAWYGMYAMFSNLFHRPVYYDTWSGGRHYSYYNDVGRYRYSSPR
DLARQQQVFTQAKKRFDSQGKRFDSPYAKTRSGASGLSRQSQQAPSVAQAAKARTEKQKFRSNYAKDSSFRDAKNRTSRS
TRRGK

Sequences:

>Translated_325_residues
MAGWLKRIFLPLGAVMLMLGLAGCGDDGAAQQAKEIDKYLTLTESRINTLGGMLDKGEIRNATLIAQYAERLKSQDASLS
PIIDALSQDAARGPLYQSLVRRRSDALAPVNFVDEDMRLAELENLYQAADPILYNDMLSDPLNALADMSKGTLPRMNAIS
REAELAANGEDFGPGSQLVGNPTYGQWQTGSDGTSFWAWYGMYAMFSNLFHRPVYYDTWSGGRHYSYYNDVGRYRYSSPR
DLARQQQVFTQAKKRFDSQGKRFDSPYAKTRSGASGLSRQSQQAPSVAQAAKARTEKQKFRSNYAKDSSFRDAKNRTSRS
TRRGK
>Mature_324_residues
AGWLKRIFLPLGAVMLMLGLAGCGDDGAAQQAKEIDKYLTLTESRINTLGGMLDKGEIRNATLIAQYAERLKSQDASLSP
IIDALSQDAARGPLYQSLVRRRSDALAPVNFVDEDMRLAELENLYQAADPILYNDMLSDPLNALADMSKGTLPRMNAISR
EAELAANGEDFGPGSQLVGNPTYGQWQTGSDGTSFWAWYGMYAMFSNLFHRPVYYDTWSGGRHYSYYNDVGRYRYSSPRD
LARQQQVFTQAKKRFDSQGKRFDSPYAKTRSGASGLSRQSQQAPSVAQAAKARTEKQKFRSNYAKDSSFRDAKNRTSRST
RRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36278; Mature: 36147

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWLKRIFLPLGAVMLMLGLAGCGDDGAAQQAKEIDKYLTLTESRINTLGGMLDKGEIR
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC
NATLIAQYAERLKSQDASLSPIIDALSQDAARGPLYQSLVRRRSDALAPVNFVDEDMRLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ELENLYQAADPILYNDMLSDPLNALADMSKGTLPRMNAISREAELAANGEDFGPGSQLVG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
NPTYGQWQTGSDGTSFWAWYGMYAMFSNLFHRPVYYDTWSGGRHYSYYNDVGRYRYSSPR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHH
DLARQQQVFTQAKKRFDSQGKRFDSPYAKTRSGASGLSRQSQQAPSVAQAAKARTEKQKF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
RSNYAKDSSFRDAKNRTSRSTRRGK
HHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGWLKRIFLPLGAVMLMLGLAGCGDDGAAQQAKEIDKYLTLTESRINTLGGMLDKGEIR
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC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HHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA