Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775797

Identifier: 119775797

GI number: 119775797

Start: 3191256

End: 3192158

Strand: Direct

Name: 119775797

Synonym: Sama_2665

Alternate gene names: NA

Gene position: 3191256-3192158 (Clockwise)

Preceding gene: 119775796

Following gene: 119775798

Centisome position: 74.11

GC content: 54.82

Gene sequence:

>903_bases
ATGATGACACTGTTACAAGACTATGGCCTGACACAAGAACTGTTGCTGATCCTGGCCATCGACCTCACCATCGCCGTCTC
GCTGCTGACTGCCATGCGTTATCTGCAGGGGTGGAGCGTCAAGGTCAACAGCAGCCATGAATTGGCTGAGAAAGATAATG
CCGCCTTCGGGATCAGCACTGCCGGCGCCGTGCTGGCACTAGGCGTTGTCCTCACAGGCGCTATCACTGGTGCTGCTGCC
CCTGACTACCTCACAGAAGCCATCGGCATGGGCGCCTATGGTGTATTTGGTATGCTGCTGATTAAAGTCGGCCGGGTCAT
GCACGACAAAATCGCCCTCAACAACATCGACAAAAACAGCCAGATCCTCAAAGGTAATTTGTCGGTAGCACTGGTGGACG
CAGCCGCAGCCGTGGCCACTGCCATTATCATTCGCGCCAGTCTACTGTGGGTTGAAGACTTAACTATTAATACCTTTATC
GCCATCGGTACGGCTTTTGTGGTGTCGCAGTTGATGCTGGTGCTGCTGACACGGCTTCGTGAAAACCGCTACAGCGCACG
TAATCAGGGTGCCTGCATGCAGGAGGCCCTGGCCAAGGGCCATACCGCCCTCGCCATTCGCCACGCAGGACATATGCTGG
CCATGGCATTAACCTTCAATGCCGCGAGCCACTTTATTCTGTTTTCGCCAACGGCCTATGTAACCAACCTCCTCGGCTGG
CTGTGTTTCTCACTGGTGATGCTGCTGGCGCTCTCTTTGCTACTAAAGCTGGTGAAACTGCTGGTGCTGGCCCGTATAAA
CCTCGCCGATGAAATCGAGCGCCAACATAATGTGGGCCTCGCGTCAGTAGAGGTCGCCATCAGTATTGCGATTGCGCTTA
TTCTCACCGGACTGATGGCCTAA

Upstream 100 bases:

>100_bases
TCCGCTCCAACTATGCCAAGGACAGCAGTTTTCGCGATGCCAAAAACCGCACCAGCCGCAGCACCCGACGTGGCAAGTGA
GCCCAGAAATTAAGGATCTG

Downstream 100 bases:

>100_bases
GCCATGGCGCTGGCACAGGACCTGCCTCAGCCGTTGACCCCGGCCAAACACCTCGGCCGCCTGGATGATGCGCTGCTATT
GGGGATCATGGCGCTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMTLLQDYGLTQELLLILAIDLTIAVSLLTAMRYLQGWSVKVNSSHELAEKDNAAFGISTAGAVLALGVVLTGAITGAAA
PDYLTEAIGMGAYGVFGMLLIKVGRVMHDKIALNNIDKNSQILKGNLSVALVDAAAAVATAIIIRASLLWVEDLTINTFI
AIGTAFVVSQLMLVLLTRLRENRYSARNQGACMQEALAKGHTALAIRHAGHMLAMALTFNAASHFILFSPTAYVTNLLGW
LCFSLVMLLALSLLLKLVKLLVLARINLADEIERQHNVGLASVEVAISIAIALILTGLMA

Sequences:

>Translated_300_residues
MMTLLQDYGLTQELLLILAIDLTIAVSLLTAMRYLQGWSVKVNSSHELAEKDNAAFGISTAGAVLALGVVLTGAITGAAA
PDYLTEAIGMGAYGVFGMLLIKVGRVMHDKIALNNIDKNSQILKGNLSVALVDAAAAVATAIIIRASLLWVEDLTINTFI
AIGTAFVVSQLMLVLLTRLRENRYSARNQGACMQEALAKGHTALAIRHAGHMLAMALTFNAASHFILFSPTAYVTNLLGW
LCFSLVMLLALSLLLKLVKLLVLARINLADEIERQHNVGLASVEVAISIAIALILTGLMA
>Mature_300_residues
MMTLLQDYGLTQELLLILAIDLTIAVSLLTAMRYLQGWSVKVNSSHELAEKDNAAFGISTAGAVLALGVVLTGAITGAAA
PDYLTEAIGMGAYGVFGMLLIKVGRVMHDKIALNNIDKNSQILKGNLSVALVDAAAAVATAIIIRASLLWVEDLTINTFI
AIGTAFVVSQLMLVLLTRLRENRYSARNQGACMQEALAKGHTALAIRHAGHMLAMALTFNAASHFILFSPTAYVTNLLGW
LCFSLVMLLALSLLLKLVKLLVLARINLADEIERQHNVGLASVEVAISIAIALILTGLMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31950; Mature: 31950

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLLQDYGLTQELLLILAIDLTIAVSLLTAMRYLQGWSVKVNSSHELAEKDNAAFGIST
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCH
AGAVLALGVVLTGAITGAAAPDYLTEAIGMGAYGVFGMLLIKVGRVMHDKIALNNIDKNS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QILKGNLSVALVDAAAAVATAIIIRASLLWVEDLTINTFIAIGTAFVVSQLMLVLLTRLR
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENRYSARNQGACMQEALAKGHTALAIRHAGHMLAMALTFNAASHFILFSPTAYVTNLLGW
HHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
LCFSLVMLLALSLLLKLVKLLVLARINLADEIERQHNVGLASVEVAISIAIALILTGLMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTLLQDYGLTQELLLILAIDLTIAVSLLTAMRYLQGWSVKVNSSHELAEKDNAAFGIST
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCH
AGAVLALGVVLTGAITGAAAPDYLTEAIGMGAYGVFGMLLIKVGRVMHDKIALNNIDKNS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QILKGNLSVALVDAAAAVATAIIIRASLLWVEDLTINTFIAIGTAFVVSQLMLVLLTRLR
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENRYSARNQGACMQEALAKGHTALAIRHAGHMLAMALTFNAASHFILFSPTAYVTNLLGW
HHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
LCFSLVMLLALSLLLKLVKLLVLARINLADEIERQHNVGLASVEVAISIAIALILTGLMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA