The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775784

Identifier: 119775784

GI number: 119775784

Start: 3177902

End: 3178630

Strand: Direct

Name: 119775784

Synonym: Sama_2652

Alternate gene names: NA

Gene position: 3177902-3178630 (Clockwise)

Preceding gene: 119775783

Following gene: 119775786

Centisome position: 73.8

GC content: 50.89

Gene sequence:

>729_bases
GTGGATAAATATTTCAATAAAAACAAGCTTGCTAAGCTGACCGGGATCCTTCTGACAGGTGCGCTGCTGTCCCCTTTGGC
CAACGCCGGTGAACTGACCGGTGAGGTTGGGGTGGCCAACGATTACCGCTTCCGTGGCATATCGCAAACCGACAGTGGTT
TCCAGGTGTCTGCAGGCATTGATTACGCCACCGACTCAGGCTTCTTCGTAGGCGCCTGGGCCAGTAACGTAGACTTCGGT
GAAGACGATGACACCAATATTGAATTGGACATCTATGCCGGTTACTACCATGAAGTCAGCGATGATCTGTCGTTCGACGT
CACTATCTACCGTTACAACTATTTTGGTGAAACCAGCGATTACGATTACTTCGAAGGTACCGTAGGCGCTGATTTCCACG
GGTTCCGTGCCGCCTACTGGTACACCAATGACTACAGTGGTTCAGACTACGACTACCATTATCTGGAGTTGAACTACAGC
TGGGAGTTTGCAGAAAACTGGAGTCTGGATCTGCACATAGGTAACAACTTCGGTGATGCGATTGAAGACGAAGACTTTGG
CTTCGGCGACTCCTTTGTCGACTACTCCATCGGGGTGTCTACCGAAGTAGCAGGTTTTGGCCTGTCCCTGGCGTGGCTCG
ATACCAACCTGGATGACGATGTACAGATTACAGACGATCTGTTCAATACCGAGGGCACTGTGCTTGCCAGCGTAAGTTAC
GCCTTCTGA

Upstream 100 bases:

>100_bases
CCCGCCATGAGGTCACAGCCAAGTGCTGATGTTTGGCAATAAATGTGAACGTGCGAATTGACGTCGTCACTGTCAACAAA
AGTAAAATGGAGAATCAAGC

Downstream 100 bases:

>100_bases
TCCCAGGTCTTTCTCCCTTCCCACCCAAACAAAAACCGCCCAATAGGGCGGTTTTTTTTATTTCACCTGGTTTGGGCGCG
GCACATCACCACAGTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDKYFNKNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGIDYATDSGFFVGAWASNVDFG
EDDDTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSDYDYFEGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYS
WEFAENWSLDLHIGNNFGDAIEDEDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSY
AF

Sequences:

>Translated_242_residues
MDKYFNKNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGIDYATDSGFFVGAWASNVDFG
EDDDTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSDYDYFEGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYS
WEFAENWSLDLHIGNNFGDAIEDEDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSY
AF
>Mature_242_residues
MDKYFNKNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGIDYATDSGFFVGAWASNVDFG
EDDDTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSDYDYFEGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYS
WEFAENWSLDLHIGNNFGDAIEDEDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSY
AF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27011; Mature: 27011

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYFNKNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECCCCCCCCEEEECCC
DYATDSGFFVGAWASNVDFGEDDDTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSD
CEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECEEEECCCCCEEEEEEEEEEECCCCCC
YDYFEGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYSWEFAENWSLDLHIGNNFGDA
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCC
IEDEDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSY
CCCCCCCCCCCEEEEECCCCEEECCCCEEEEEEECCCCCCEEEEHHHCCCCCEEEEEEEE
AF
CC
>Mature Secondary Structure
MDKYFNKNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECCCCCCCCEEEECCC
DYATDSGFFVGAWASNVDFGEDDDTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSD
CEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECEEEECCCCCEEEEEEEEEEECCCCCC
YDYFEGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYSWEFAENWSLDLHIGNNFGDA
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCC
IEDEDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSY
CCCCCCCCCCCEEEEECCCCEEECCCCEEEEEEECCCCCCEEEEHHHCCCCCEEEEEEEE
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA