Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775783

Identifier: 119775783

GI number: 119775783

Start: 3177428

End: 3177793

Strand: Direct

Name: 119775783

Synonym: Sama_2651

Alternate gene names: NA

Gene position: 3177428-3177793 (Clockwise)

Preceding gene: 119775782

Following gene: 119775784

Centisome position: 73.79

GC content: 47.27

Gene sequence:

>366_bases
ATGACTTCAAAAATATCTGATATACAGCGATTTTCAGCATCAAACGCCCAAACAGAACAGTATTTTCTTCCCGAGGAAAA
ACGCCTTAAGGGCAATCCGCTGCAATCGTTAACCAACCACTATTCCAGCCCCTGTGGCCAGTTTCACGCCGGGGTTTGGC
AGAGTGCTGGCGGCAAATGGAATGTCAACTATACTGAACACGAATTTTGTGACATTCTCGAAGGGTCCAGCATTATCTGC
GATAGCGAAGGTAACAGCCTGACCGTGGAAGCTGGAGACAAGTTCGTTATCCCCGCCGGTTTTACAGGCACATGGGAGGT
GGTTGAACATTGCCGCAAGATCTATGTGATTTTTGAGCAAAGCTAA

Upstream 100 bases:

>100_bases
CGCACGCTGGCCACAGGGAAAACAGCTGGCTGCTGAGTTTGTAATGCCCACGATGAAGTAAGCAGATGCGGGGCACCAAG
GTGCCCCACCCGGAGTAAGA

Downstream 100 bases:

>100_bases
CAGGTAAACCCGCCATGAGGTCACAGCCAAGTGCTGATGTTTGGCAATAAATGTGAACGTGCGAATTGACGTCGTCACTG
TCAACAAAAGTAAAATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin Superfamily Protein; Of Cupin Superfamily

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTSKISDIQRFSASNAQTEQYFLPEEKRLKGNPLQSLTNHYSSPCGQFHAGVWQSAGGKWNVNYTEHEFCDILEGSSIIC
DSEGNSLTVEAGDKFVIPAGFTGTWEVVEHCRKIYVIFEQS

Sequences:

>Translated_121_residues
MTSKISDIQRFSASNAQTEQYFLPEEKRLKGNPLQSLTNHYSSPCGQFHAGVWQSAGGKWNVNYTEHEFCDILEGSSIIC
DSEGNSLTVEAGDKFVIPAGFTGTWEVVEHCRKIYVIFEQS
>Mature_120_residues
TSKISDIQRFSASNAQTEQYFLPEEKRLKGNPLQSLTNHYSSPCGQFHAGVWQSAGGKWNVNYTEHEFCDILEGSSIICD
SEGNSLTVEAGDKFVIPAGFTGTWEVVEHCRKIYVIFEQS

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13555; Mature: 13424

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKISDIQRFSASNAQTEQYFLPEEKRLKGNPLQSLTNHYSSPCGQFHAGVWQSAGGKW
CCCCHHHHHHHCCCCCCCCEEECCCHHCCCCCHHHHHHHHHCCCCCHHHCCHHHCCCCEE
NVNYTEHEFCDILEGSSIICDSEGNSLTVEAGDKFVIPAGFTGTWEVVEHCRKIYVIFEQ
ECCCCHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHEEEEEEC
S
C
>Mature Secondary Structure 
TSKISDIQRFSASNAQTEQYFLPEEKRLKGNPLQSLTNHYSSPCGQFHAGVWQSAGGKW
CCCHHHHHHHCCCCCCCCEEECCCHHCCCCCHHHHHHHHHCCCCCHHHCCHHHCCCCEE
NVNYTEHEFCDILEGSSIICDSEGNSLTVEAGDKFVIPAGFTGTWEVVEHCRKIYVIFEQ
ECCCCHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHEEEEEEC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA