The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775745

Identifier: 119775745

GI number: 119775745

Start: 3128860

End: 3129789

Strand: Direct

Name: 119775745

Synonym: Sama_2613

Alternate gene names: NA

Gene position: 3128860-3129789 (Clockwise)

Preceding gene: 119775744

Following gene: 119775747

Centisome position: 72.66

GC content: 52.47

Gene sequence:

>930_bases
ATGAAAACACTGTACTCACTGTCGCTGCTGTGCCTGCTCGCAAGCCCACTGTTTGCCGCCGAAAAAATCGATAAAAGCCT
GGATGTTGGTTCCCAGGTGGTACTGGATATCAGGGTTCAGCGCGGCGAGGTGGAAATAAGCCCCTGGGATAAAAACACCA
TTCAGGTGCAGGGCACGCTCGATGAGCTCAGCGAAGGTCTGCTTTTTGAGAATCAGGGCAGCCGCATCCTGCTGGAAGAC
AAGATGCCTAAAAGTTATCAGGGCAATAAGAGTAATGGCTCAGAGCTTGTCATCAGGGTTCCCGCTAACCTTACGTTGGC
CGGCGAGGGGGTATCTGCAGACTATCGGGTTGATGGGCTGCAAGGTGAGATAGGGCTCAGCACAGTATCGGGCGACATCA
AGGCCAATGCACTTGGTGGCAAAGTCACGTTCAATACAGTGTCGGGCGAAGTGGATAGTGAGAAGCTTACCGGCACAGTC
AATATTGAGACTGTATCCGGAAGAATCACAGACAAGCATTCCACCAACGATGAAGCCAGCTACAAGTCTGTCAGCGGTGA
TATTCATCTAAACAACCAGACGAAAAAAGTCCGTATCGAACAGGTCTCCGGTGATACCGAAGCAAGGCTACCCAACGCCC
GAGCCGTGCAATATAACGCCGTTAGCGGTGATGCTGAACTAGCCTTGAAAGGCGATGTGAAGGTGTCGGGTGAATCGGTT
AGCGGAGACTTGTCAGTCAAACTGCTTGGCGATGCCGATGTCCGTGTGGCGATTAACGGTGGCCCAAGCGGAAAAATTCA
TAACGGCCTGACCGATGACGCCCCCAAAAAGCCCAAGTACGGGCCCGGCAGCACTCTGGATATGGTGCTCGGCGGTGGTA
AAGGAGTGATAGAACTCTCCACCCTCAGCGGTAAATTATCGGTGGAATAA

Upstream 100 bases:

>100_bases
AACAACTTTGGCAGCTCTGGCTCTGGGTCCAGCGCCGCGAAATTGAACTTTTAACCCAGGGACAAAGGCTGCCAGCCGGC
GCCACACAAGGAGATACCCT

Downstream 100 bases:

>100_bases
GCGAAGCAACAATAAAAAGGGCCTTCATTGAAGGCCCTTTTTGATATGCAGGTTTATTTCACCGAGGCAATTTCGGCTTC
GGTCAGATAACGCCACTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKTLYSLSLLCLLASPLFAAEKIDKSLDVGSQVVLDIRVQRGEVEISPWDKNTIQVQGTLDELSEGLLFENQGSRILLED
KMPKSYQGNKSNGSELVIRVPANLTLAGEGVSADYRVDGLQGEIGLSTVSGDIKANALGGKVTFNTVSGEVDSEKLTGTV
NIETVSGRITDKHSTNDEASYKSVSGDIHLNNQTKKVRIEQVSGDTEARLPNARAVQYNAVSGDAELALKGDVKVSGESV
SGDLSVKLLGDADVRVAINGGPSGKIHNGLTDDAPKKPKYGPGSTLDMVLGGGKGVIELSTLSGKLSVE

Sequences:

>Translated_309_residues
MKTLYSLSLLCLLASPLFAAEKIDKSLDVGSQVVLDIRVQRGEVEISPWDKNTIQVQGTLDELSEGLLFENQGSRILLED
KMPKSYQGNKSNGSELVIRVPANLTLAGEGVSADYRVDGLQGEIGLSTVSGDIKANALGGKVTFNTVSGEVDSEKLTGTV
NIETVSGRITDKHSTNDEASYKSVSGDIHLNNQTKKVRIEQVSGDTEARLPNARAVQYNAVSGDAELALKGDVKVSGESV
SGDLSVKLLGDADVRVAINGGPSGKIHNGLTDDAPKKPKYGPGSTLDMVLGGGKGVIELSTLSGKLSVE
>Mature_309_residues
MKTLYSLSLLCLLASPLFAAEKIDKSLDVGSQVVLDIRVQRGEVEISPWDKNTIQVQGTLDELSEGLLFENQGSRILLED
KMPKSYQGNKSNGSELVIRVPANLTLAGEGVSADYRVDGLQGEIGLSTVSGDIKANALGGKVTFNTVSGEVDSEKLTGTV
NIETVSGRITDKHSTNDEASYKSVSGDIHLNNQTKKVRIEQVSGDTEARLPNARAVQYNAVSGDAELALKGDVKVSGESV
SGDLSVKLLGDADVRVAINGGPSGKIHNGLTDDAPKKPKYGPGSTLDMVLGGGKGVIELSTLSGKLSVE

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32495; Mature: 32495

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYSLSLLCLLASPLFAAEKIDKSLDVGSQVVLDIRVQRGEVEISPWDKNTIQVQGTL
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEECCEEEECCCCCCEEEEEECH
DELSEGLLFENQGSRILLEDKMPKSYQGNKSNGSELVIRVPANLTLAGEGVSADYRVDGL
HHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEECC
QGEIGLSTVSGDIKANALGGKVTFNTVSGEVDSEKLTGTVNIETVSGRITDKHSTNDEAS
CCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEEEEECEEECCCCCCCCCC
YKSVSGDIHLNNQTKKVRIEQVSGDTEARLPNARAVQYNAVSGDAELALKGDVKVSGESV
EEEECCEEEECCCCEEEEEEEECCCCHHCCCCCEEEEEEEECCCEEEEEECCEEECCCCC
SGDLSVKLLGDADVRVAINGGPSGKIHNGLTDDAPKKPKYGPGSTLDMVLGGGKGVIELS
CCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE
TLSGKLSVE
EECCEEECC
>Mature Secondary Structure
MKTLYSLSLLCLLASPLFAAEKIDKSLDVGSQVVLDIRVQRGEVEISPWDKNTIQVQGTL
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEECCEEEECCCCCCEEEEEECH
DELSEGLLFENQGSRILLEDKMPKSYQGNKSNGSELVIRVPANLTLAGEGVSADYRVDGL
HHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEECC
QGEIGLSTVSGDIKANALGGKVTFNTVSGEVDSEKLTGTVNIETVSGRITDKHSTNDEAS
CCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEEEEECEEECCCCCCCCCC
YKSVSGDIHLNNQTKKVRIEQVSGDTEARLPNARAVQYNAVSGDAELALKGDVKVSGESV
EEEECCEEEECCCCEEEEEEEECCCCHHCCCCCEEEEEEEECCCEEEEEECCEEECCCCC
SGDLSVKLLGDADVRVAINGGPSGKIHNGLTDDAPKKPKYGPGSTLDMVLGGGKGVIELS
CCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE
TLSGKLSVE
EECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA