| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775729
Identifier: 119775729
GI number: 119775729
Start: 3104043
End: 3104312
Strand: Reverse
Name: 119775729
Synonym: Sama_2597
Alternate gene names: NA
Gene position: 3104312-3104043 (Counterclockwise)
Preceding gene: 119775731
Following gene: 119775728
Centisome position: 72.09
GC content: 54.07
Gene sequence:
>270_bases ATGGAAAAAGCGGCATATCTGGATGCCATGGGCATCGCCCGTTGGCGTGAGGTTGGCAAGCCTGCGCCTTTATCGCCTGA GTTGAAGCAGGCGATTAACAACATGTTTGATCATCCTCTGTTCGCTGAGCTTGAGTGCCAGGTTAAAGAGTCATTTATCG CACTCACACCATGTTCCGGCGAGAGTCGCTCTGTGTCACTGGGACAACTGGATACGCCTCAAGGCAAACGAGCGCTCTGG CATGCGCTCAGCACCTGCGGAGCCTTGTAA
Upstream 100 bases:
>100_bases TCTCCTCCTGTTTTTGATTTAATTAGAATAATAAATTAAAAAATTCATTTGAAATTGAAATAATAGATTAAAGTGTTCGG TTCGATAAAGAGGATAGGCA
Downstream 100 bases:
>100_bases TGAAGATTGAGGCACTCGGTCAGCACGATGCTCCGAATATGGCGTTCATTGAGTCTGAGGCTCACTCCCATCCGATGTCG GAGGGAGCCCTGGCCGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MEKAAYLDAMGIARWREVGKPAPLSPELKQAINNMFDHPLFAELECQVKESFIALTPCSGESRSVSLGQLDTPQGKRALW HALSTCGAL
Sequences:
>Translated_89_residues MEKAAYLDAMGIARWREVGKPAPLSPELKQAINNMFDHPLFAELECQVKESFIALTPCSGESRSVSLGQLDTPQGKRALW HALSTCGAL >Mature_89_residues MEKAAYLDAMGIARWREVGKPAPLSPELKQAINNMFDHPLFAELECQVKESFIALTPCSGESRSVSLGQLDTPQGKRALW HALSTCGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9729; Mature: 9729
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAAYLDAMGIARWREVGKPAPLSPELKQAINNMFDHPLFAELECQVKESFIALTPCSG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHEECCCEEEECCCCC ESRSVSLGQLDTPQGKRALWHALSTCGAL CCCCEECCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MEKAAYLDAMGIARWREVGKPAPLSPELKQAINNMFDHPLFAELECQVKESFIALTPCSG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHEECCCEEEECCCCC ESRSVSLGQLDTPQGKRALWHALSTCGAL CCCCEECCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA