| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is rimI [H]
Identifier: 119775728
GI number: 119775728
Start: 3103594
End: 3104043
Strand: Reverse
Name: rimI [H]
Synonym: Sama_2596
Alternate gene names: 119775728
Gene position: 3104043-3103594 (Counterclockwise)
Preceding gene: 119775729
Following gene: 119775713
Centisome position: 72.08
GC content: 54.0
Gene sequence:
>450_bases ATGAAGATTGAGGCACTCGGTCAGCACGATGCTCCGAATATGGCGTTCATTGAGTCTGAGGCTCACTCCCATCCGATGTC GGAGGGAGCCCTGGCCGATTGCTTCGGTCCTCTGTATCGCTGCAGTGGACTCTATCGTGACGATGTGCTGCTGGGATTTG CCATAGTGCAGCAGATAGTGGATGAGGCAACCCTGTTTGATATTTGCGTGCTTCCTTCGGCACAGGGGAAAGGTCTGGGT AAGCTACTGCTCGAGCAGGTGATTGCCGATGCACAAAACCATGGGGCTCAGGTGCTGATGCTCGAGGTTCGTGCCTCAAA TATGGCCGCCATTGGCCTTTATCAGCGTCTGGGATTTACCGAGATTGGCAGGCGCAAGGGCTACTATCCAACAATAGATG GCCGCGAGGATGCGGTGCTGATGGATTTAAGGCTGGATACGGCTGATTAA
Upstream 100 bases:
>100_bases CATGTTCCGGCGAGAGTCGCTCTGTGTCACTGGGACAACTGGATACGCCTCAAGGCAAACGAGCGCTCTGGCATGCGCTC AGCACCTGCGGAGCCTTGTA
Downstream 100 bases:
>100_bases GTTACCCCAATAAAAACGGCGCCAGTGCGCCGTTTTTAATTAAAGCCTGACTTTAATGCTAAGCCTGCTTATTTCACTTC CTTGCCCTGTGCCTGGAGGT
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKIEALGQHDAPNMAFIESEAHSHPMSEGALADCFGPLYRCSGLYRDDVLLGFAIVQQIVDEATLFDICVLPSAQGKGLG KLLLEQVIADAQNHGAQVLMLEVRASNMAAIGLYQRLGFTEIGRRKGYYPTIDGREDAVLMDLRLDTAD
Sequences:
>Translated_149_residues MKIEALGQHDAPNMAFIESEAHSHPMSEGALADCFGPLYRCSGLYRDDVLLGFAIVQQIVDEATLFDICVLPSAQGKGLG KLLLEQVIADAQNHGAQVLMLEVRASNMAAIGLYQRLGFTEIGRRKGYYPTIDGREDAVLMDLRLDTAD >Mature_149_residues MKIEALGQHDAPNMAFIESEAHSHPMSEGALADCFGPLYRCSGLYRDDVLLGFAIVQQIVDEATLFDICVLPSAQGKGLG KLLLEQVIADAQNHGAQVLMLEVRASNMAAIGLYQRLGFTEIGRRKGYYPTIDGREDAVLMDLRLDTAD
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=141, Percent_Identity=47.5177304964539, Blast_Score=128, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 16269; Mature: 16269
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEALGQHDAPNMAFIESEAHSHPMSEGALADCFGPLYRCSGLYRDDVLLGFAIVQQIV CCCCCCCCCCCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DEATLFDICVLPSAQGKGLGKLLLEQVIADAQNHGAQVLMLEVRASNMAAIGLYQRLGFT HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHH EIGRRKGYYPTIDGREDAVLMDLRLDTAD HHHHCCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MKIEALGQHDAPNMAFIESEAHSHPMSEGALADCFGPLYRCSGLYRDDVLLGFAIVQQIV CCCCCCCCCCCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DEATLFDICVLPSAQGKGLGKLLLEQVIADAQNHGAQVLMLEVRASNMAAIGLYQRLGFT HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHH EIGRRKGYYPTIDGREDAVLMDLRLDTAD HHHHCCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]