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The map label for this gene is 119775676

Identifier: 119775676

GI number: 119775676

Start: 3054370

End: 3054876

Strand: Reverse

Name: 119775676

Synonym: Sama_2544

Alternate gene names: NA

Gene position: 3054876-3054370 (Counterclockwise)

Preceding gene: 119775677

Following gene: 119775675

Centisome position: 70.94

GC content: 54.44

Gene sequence:

>507_bases
ATGGGAAAACTGATTGGATTTTTTGAGGGGATAACTGAGGCCCTGGGGCGGCTGGTGGGGTGGTTTACCCTTGGCATGGT
GCTGATGACCCTCGCCGTGGTAGTGCTCCGCTATGCCTTTGCAACCGGCGCCACGGCGCTGCAGGAAACAGCGCTTTATC
TTCATGGTGCCGTTTTTACCCTGGCTGCGGGTTTTACCCTGAAACGGGATGCCCATGTGCGGGTTGACGTCTTTTATCGC
CAGTGCAGTGAGCGCACCCGTCATTGGATAGATTTTGTCGGTACCCTGGTGTTTCTGTTTCCCCTGTCTCTTGCCATAGG
CCTGTACAGTTTTGATTATGTGATGAATGCCTGGCGCATTCAGGAAAGCTCTGCAGAGGCTGGTGGCCTGCCCTGGGTTT
ACCTGCAAAAGTCACTGCTGCTGGGGCTGTGCGTAAGTTTGATATTGCAGGGATTGTGTGAACTTTACCGTCATGGCAAG
GCGCTCTTTGGCAGGGAGGCTTGCTGA

Upstream 100 bases:

>100_bases
TTTCAGCATCGGCCAAGGACCTTGGCGGTTTCCTCGCTGTGGGATTTCTGTTATCAATAGGTTGCATTGATAACAATAAC
GACATAACTACAGCTTAATT

Downstream 100 bases:

>100_bases
TGGCGCTGCTGCTGTTTCTCATCATTTGTCTGGTGTTGATGCTGGGCTACCCGGTGGCACTCACCCTGGGTGGTGTGGCC
TTTTTGTTCGCCCTGTTCGC

Product: TRAP-type transport system, small permease component

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite Transporter Small Subunit; Mannitol Transporter; TRAP-Type Transport System Small Permease Component; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; TRAP Transporter DctQ Family Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Transporter Small Subunit; C4-Dicarboxylate Transporter Permease; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGKLIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFTLAAGFTLKRDAHVRVDVFYR
QCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRIQESSAEAGGLPWVYLQKSLLLGLCVSLILQGLCELYRHGK
ALFGREAC

Sequences:

>Translated_168_residues
MGKLIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFTLAAGFTLKRDAHVRVDVFYR
QCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRIQESSAEAGGLPWVYLQKSLLLGLCVSLILQGLCELYRHGK
ALFGREAC
>Mature_167_residues
GKLIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFTLAAGFTLKRDAHVRVDVFYRQ
CSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRIQESSAEAGGLPWVYLQKSLLLGLCVSLILQGLCELYRHGKA
LFGREAC

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18708; Mature: 18577

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGFTLKRDAHVRVDVFYRQCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRI
HHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QESSAEAGGLPWVYLQKSLLLGLCVSLILQGLCELYRHGKALFGREAC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
GKLIGFFEGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGFTLKRDAHVRVDVFYRQCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRI
HHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QESSAEAGGLPWVYLQKSLLLGLCVSLILQGLCELYRHGKALFGREAC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA