| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is bolA [H]
Identifier: 119775677
GI number: 119775677
Start: 3055027
End: 3055326
Strand: Reverse
Name: bolA [H]
Synonym: Sama_2545
Alternate gene names: 119775677
Gene position: 3055326-3055027 (Counterclockwise)
Preceding gene: 119775678
Following gene: 119775676
Centisome position: 70.95
GC content: 56.33
Gene sequence:
>300_bases ATGTCTGTTGCCGATATTATTTCCGCCAAGCTGAATGAAGCCTTCGCCCCCACGCATCTTGAAGTGATTAACGAAAGCTA CATGCACAATGTGCCCAAGGGTTCTGAAACCCATTTCAAGGTGGTCATCGCCAGTGACAGCTTTGAGGGACAGCGTCTGA TTGGCCGCCACCGCGCCGTGAATGCGGCGCTTGCAGTTGAGCTGGCCAACGGGGTCCATGCCCTGTCGATGTTTACCTAT ACGCCCGACGAGTGGCAGGGTATGGACGCCGTGCCTGCATCGCCAAAGTGTCGCGGCTGA
Upstream 100 bases:
>100_bases AGGGTCCACTATCGGGAAATGGCCTTTGCGGCACACAGGGTTTGATCTTTGACCGGGGCGGCGCTAATCTGCCGCCAATC GCCATTACCGGAACACTGTT
Downstream 100 bases:
>100_bases CGTAGTGATTGCGCATTGTTAAAACACCCGCCCCCGGCGGGTGTTTTGATTTTCAGCATCGGCCAAGGACCTTGGCGGTT TCCTCGCTGTGGGATTTCTG
Product: putative cell division protein BolA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSVADIISAKLNEAFAPTHLEVINESYMHNVPKGSETHFKVVIASDSFEGQRLIGRHRAVNAALAVELANGVHALSMFTY TPDEWQGMDAVPASPKCRG
Sequences:
>Translated_99_residues MSVADIISAKLNEAFAPTHLEVINESYMHNVPKGSETHFKVVIASDSFEGQRLIGRHRAVNAALAVELANGVHALSMFTY TPDEWQGMDAVPASPKCRG >Mature_98_residues SVADIISAKLNEAFAPTHLEVINESYMHNVPKGSETHFKVVIASDSFEGQRLIGRHRAVNAALAVELANGVHALSMFTYT PDEWQGMDAVPASPKCRG
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=93, Percent_Identity=49.4623655913978, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87081740, Length=100, Percent_Identity=55, Blast_Score=118, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17541430, Length=97, Percent_Identity=52.5773195876289, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI221459039, Length=93, Percent_Identity=44.0860215053763, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 10751; Mature: 10620
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVADIISAKLNEAFAPTHLEVINESYMHNVPKGSETHFKVVIASDSFEGQRLIGRHRAV CCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH NAALAVELANGVHALSMFTYTPDEWQGMDAVPASPKCRG HHHHEEHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVADIISAKLNEAFAPTHLEVINESYMHNVPKGSETHFKVVIASDSFEGQRLIGRHRAV CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH NAALAVELANGVHALSMFTYTPDEWQGMDAVPASPKCRG HHHHEEHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7805867 [H]