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The map label for this gene is yggU [C]

Identifier: 119775613

GI number: 119775613

Start: 2982473

End: 2982760

Strand: Direct

Name: yggU [C]

Synonym: Sama_2480

Alternate gene names: 119775613

Gene position: 2982473-2982760 (Clockwise)

Preceding gene: 119775612

Following gene: 119775614

Centisome position: 69.26

GC content: 55.56

Gene sequence:

>288_bases
ATGAGCGCCATCACTCGCCAGGACGAGGACTTACTGCTGGCGTTGTATGTACAGCCCAAGGCCAGCCGGGACGAGCTGGT
TGGTCTTCACGGCGAAGAACTAAAACTTGCCATCACAGCACCGCCTGTCGATGGCAAGGCCAACGCCCATATCTGCAAGC
TGCTGGCAAAGGCCTTCAAGGTGCCCAAAGGCAAGGTGTCTATCGAGCGGGGCGAGCTTGGACGGCATAAATTGGTACGT
ATTCAGGCGCCGGAAATAATCCCTGACGATTTCGCACAATTTCTCTAG

Upstream 100 bases:

>100_bases
CCATTGGTGGCCTTGACCTCTCTGTACTGGTGGTCTTTATTGGCCTTAATTTCATCAACATGTTACTCGCCCAATACGTG
CCTTTCTGGGCGTTTATCTG

Downstream 100 bases:

>100_bases
TCCCACGGCAGTCTTGATAAAATGCTGAATACGGCCATGGGGTTTATACTTATAACCGAGTTCCCTTGAGGAGGATAAGG
ACATGTTTCGTCAACTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSAITRQDEDLLLALYVQPKASRDELVGLHGEELKLAITAPPVDGKANAHICKLLAKAFKVPKGKVSIERGELGRHKLVR
IQAPEIIPDDFAQFL

Sequences:

>Translated_95_residues
MSAITRQDEDLLLALYVQPKASRDELVGLHGEELKLAITAPPVDGKANAHICKLLAKAFKVPKGKVSIERGELGRHKLVR
IQAPEIIPDDFAQFL
>Mature_94_residues
SAITRQDEDLLLALYVQPKASRDELVGLHGEELKLAITAPPVDGKANAHICKLLAKAFKVPKGKVSIERGELGRHKLVRI
QAPEIIPDDFAQFL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=95, Percent_Identity=57.8947368421053, Blast_Score=122, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2480_SHEAM (A1S8H7)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928353.1
- ProteinModelPortal:   A1S8H7
- SMR:   A1S8H7
- STRING:   A1S8H7
- GeneID:   4604728
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2480
- NMPDR:   fig|326297.7.peg.2321
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- PhylomeDB:   A1S8H7
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10452; Mature: 10321

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAITRQDEDLLLALYVQPKASRDELVGLHGEELKLAITAPPVDGKANAHICKLLAKAFK
CCCCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
VPKGKVSIERGELGRHKLVRIQAPEIIPDDFAQFL
CCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCC
>Mature Secondary Structure 
SAITRQDEDLLLALYVQPKASRDELVGLHGEELKLAITAPPVDGKANAHICKLLAKAFK
CCCCCCCCCEEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC
VPKGKVSIERGELGRHKLVRIQAPEIIPDDFAQFL
CCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA