Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775614

Identifier: 119775614

GI number: 119775614

Start: 2982843

End: 2983277

Strand: Direct

Name: 119775614

Synonym: Sama_2481

Alternate gene names: NA

Gene position: 2982843-2983277 (Clockwise)

Preceding gene: 119775613

Following gene: 119775615

Centisome position: 69.27

GC content: 48.97

Gene sequence:

>435_bases
ATGTTTCGTCAACTCTTTGCTGCGCTGCTGCTAACTGCTAGCCTGTGCGGCATCGCCAGCGCTGAGCAAAAAGAACAGGT
AGGTCAGTTCGATATCCACTATATGGCGCTGCCAAGTACCTTTCTGACACCCGCGATTGCCAAGAACTATGGCATAGAGC
GCTCCAACTACACTGGCATAGTCAATATTGCCGTGCTGGACACTGCTGAAGAGGGTAATCCGGCTGTCGCAGTAGAAATT
TCGGGCATCGCCAATAACCTGCTTGATGCCAAAGTGGAGCTGAAGTTCCGTGAAATCCGTGAAGGTGCCGCCATCTACTA
CATTGCCGAGGTGCCTTACCGCAGCGATGAAGAGATAAACTTCCAAATCGCCTTAAGAAGCGGAAACAAGCTAAATACCA
CATTGAAATTCAAGCAAAAATTCTACGTCGACTAA

Upstream 100 bases:

>100_bases
TTCGCACAATTTCTCTAGTCCCACGGCAGTCTTGATAAAATGCTGAATACGGCCATGGGGTTTATACTTATAACCGAGTT
CCCTTGAGGAGGATAAGGAC

Downstream 100 bases:

>100_bases
TTTGTACACCTTCACTGAAGCCTGCATCTGCGGGCTTTGTTTTTTCTGTCTTTCCAAGGCTTCCTTGGGTATCATGACGC
CGATTTTGAAAGGGCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFRQLFAALLLTASLCGIASAEQKEQVGQFDIHYMALPSTFLTPAIAKNYGIERSNYTGIVNIAVLDTAEEGNPAVAVEI
SGIANNLLDAKVELKFREIREGAAIYYIAEVPYRSDEEINFQIALRSGNKLNTTLKFKQKFYVD

Sequences:

>Translated_144_residues
MFRQLFAALLLTASLCGIASAEQKEQVGQFDIHYMALPSTFLTPAIAKNYGIERSNYTGIVNIAVLDTAEEGNPAVAVEI
SGIANNLLDAKVELKFREIREGAAIYYIAEVPYRSDEEINFQIALRSGNKLNTTLKFKQKFYVD
>Mature_144_residues
MFRQLFAALLLTASLCGIASAEQKEQVGQFDIHYMALPSTFLTPAIAKNYGIERSNYTGIVNIAVLDTAEEGNPAVAVEI
SGIANNLLDAKVELKFREIREGAAIYYIAEVPYRSDEEINFQIALRSGNKLNTTLKFKQKFYVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16014; Mature: 16014

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQLFAALLLTASLCGIASAEQKEQVGQFDIHYMALPSTFLTPAIAKNYGIERSNYTGI
CHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCHHHCHHHHHHCCCCCCCCCEE
VNIAVLDTAEEGNPAVAVEISGIANNLLDAKVELKFREIREGAAIYYIAEVPYRSDEEIN
EEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCCCCCCEE
FQIALRSGNKLNTTLKFKQKFYVD
EEEEEECCCEECEEEEEEEEECCC
>Mature Secondary Structure
MFRQLFAALLLTASLCGIASAEQKEQVGQFDIHYMALPSTFLTPAIAKNYGIERSNYTGI
CHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCHHHCHHHHHHCCCCCCCCCEE
VNIAVLDTAEEGNPAVAVEISGIANNLLDAKVELKFREIREGAAIYYIAEVPYRSDEEIN
EEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHCCCEEEEEEEECCCCCCCCEE
FQIALRSGNKLNTTLKFKQKFYVD
EEEEEECCCEECEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA