Click here to switch to the map view.

The map label for this gene is 119775595

Identifier: 119775595

GI number: 119775595

Start: 2968693

End: 2969061

Strand: Reverse

Name: 119775595

Synonym: Sama_2461

Alternate gene names: NA

Gene position: 2969061-2968693 (Counterclockwise)

Preceding gene: 119775596

Following gene: 119775593

Centisome position: 68.95

GC content: 53.93

Gene sequence:

>369_bases
ATGAAATTCCTAAGCCGTCGTTTGGTTAAACCCGATCACCTGAATCCTGCCAATACGCTCTTTGGCGGCCAACTGCTCAG
CTGGCTCGATGAAGAAGCGGCAATCTTTGCTGCCTGTCAGATGAAGAGCGACAGGCACGTGACCAAAATTATCGCTGAAA
TCAATTTCATCACTCCGGCCAGAGCCGGTGATGTGTTGGAGTTTGGCTTTGAGCTTATCAGTGTGGGTCACAGTTCCATC
GCGGTAAGGGCGATGGTGCGCAACAAGGTTTCCCAGTTGCCTGTGGTGACGGTGGAAAAGCTGGTGTTTGTGCACGTGAA
TGAGAAGGGATTGCCCGCACCCCATGGGATGCGGGCGGCAGCGGCCTGA

Upstream 100 bases:

>100_bases
TTAGAACAGCCGGTTTTTTTAATTTATTGAAATATAAGATTTAAAATATTGGCTTAGAGGTTGCTTTAGTCATGGGGCCC
ACTATCACGGAGGACGCCCC

Downstream 100 bases:

>100_bases
TCAGTTCTCTTCTTTCAACTCTTCTTTCACTGAGTTGACTGCATCGCGGGAGGCATGGCCAACAGCCTTGGTGGCATCAC
GGGTGGCGTGACCTATTTCG

Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Products: NA

Alternate protein names: Acyl-CoA Thioester Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-CoA Hydrolase; Thioesterase Family Protein; Long-Chain Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase Family Protein; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKFLSRRLVKPDHLNPANTLFGGQLLSWLDEEAAIFAACQMKSDRHVTKIIAEINFITPARAGDVLEFGFELISVGHSSI
AVRAMVRNKVSQLPVVTVEKLVFVHVNEKGLPAPHGMRAAAA

Sequences:

>Translated_122_residues
MKFLSRRLVKPDHLNPANTLFGGQLLSWLDEEAAIFAACQMKSDRHVTKIIAEINFITPARAGDVLEFGFELISVGHSSI
AVRAMVRNKVSQLPVVTVEKLVFVHVNEKGLPAPHGMRAAAA
>Mature_122_residues
MKFLSRRLVKPDHLNPANTLFGGQLLSWLDEEAAIFAACQMKSDRHVTKIIAEINFITPARAGDVLEFGFELISVGHSSI
AVRAMVRNKVSQLPVVTVEKLVFVHVNEKGLPAPHGMRAAAA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13359; Mature: 13359

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLSRRLVKPDHLNPANTLFGGQLLSWLDEEAAIFAACQMKSDRHVTKIIAEINFITPA
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
RAGDVLEFGFELISVGHSSIAVRAMVRNKVSQLPVVTVEKLVFVHVNEKGLPAPHGMRAA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCCCCCC
AA
CC
>Mature Secondary Structure
MKFLSRRLVKPDHLNPANTLFGGQLLSWLDEEAAIFAACQMKSDRHVTKIIAEINFITPA
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
RAGDVLEFGFELISVGHSSIAVRAMVRNKVSQLPVVTVEKLVFVHVNEKGLPAPHGMRAA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA