| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775593
Identifier: 119775593
GI number: 119775593
Start: 2967768
End: 2968352
Strand: Reverse
Name: 119775593
Synonym: Sama_2459
Alternate gene names: NA
Gene position: 2968352-2967768 (Counterclockwise)
Preceding gene: 119775595
Following gene: 119775592
Centisome position: 68.93
GC content: 56.75
Gene sequence:
>585_bases ATGACCAAGCCCCACTCCCAAGTGATTATCCGCCAGATGCAGCCAGAGGACTTTGACGCCGTATTGGCCCTTGGCGAAGC CGTTCACGGCGACGGCTATCTCGATTTACCCCACCTGCAAACCCTGTGGCACGCAGGGATAAAGGCTGGCATCAACGCAA GCTTTGTGGCGCTGGACCAAAACGGCCTTCTCGGTTTTCGCCTTACCCTGGCAGCCGGACAGTGGCAACCCGACCGCTGG TGCTCACCATCACTCTGGGGCATAACCCCAGACAAAGTCTGTTATTTCAAATCCAATACCCTGGCCCCTGAGGCCAGAGG TAAAGGGCTTGGCGGCATCTTGCTGCAACATGCCGTCGATGCTGTGAAGGCCCAGGGGGCGCTTGGCGGTATTGCTCATT TATGGCAGGAAAGCCCCCATAACGCGGCGGTGCGTTACTTCTCCAAGGCGGGGGGCAGGCTTATTAAGGCGCATCCCGAC CGCTGGAATCAATCCCACGATAATCCGGATTACCTGTGTACCCTGTGTGGCAACGATTGCCATTGCACGGCGTGCGAGAT GTTATTGGTTTTTCAGGAGTCTTAA
Upstream 100 bases:
>100_bases AGGCGGCTTTCCTTGAAAAGTCACCGGTGCCTAATTGGGCACGCCTGTGTTATTGTTCACAAAACAATAACAAGATGCCA TCAGGCAACGACATCCAATC
Downstream 100 bases:
>100_bases TTGTACGACCCATTAATCAGCACCAATGCGGCGCAGCAAGCCTTGCCGTCCACTTTTTGGTCCGGCACCACTGAACCCTT ACCTGAGTCACCAAGGCTAC
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTKPHSQVIIRQMQPEDFDAVLALGEAVHGDGYLDLPHLQTLWHAGIKAGINASFVALDQNGLLGFRLTLAAGQWQPDRW CSPSLWGITPDKVCYFKSNTLAPEARGKGLGGILLQHAVDAVKAQGALGGIAHLWQESPHNAAVRYFSKAGGRLIKAHPD RWNQSHDNPDYLCTLCGNDCHCTACEMLLVFQES
Sequences:
>Translated_194_residues MTKPHSQVIIRQMQPEDFDAVLALGEAVHGDGYLDLPHLQTLWHAGIKAGINASFVALDQNGLLGFRLTLAAGQWQPDRW CSPSLWGITPDKVCYFKSNTLAPEARGKGLGGILLQHAVDAVKAQGALGGIAHLWQESPHNAAVRYFSKAGGRLIKAHPD RWNQSHDNPDYLCTLCGNDCHCTACEMLLVFQES >Mature_193_residues TKPHSQVIIRQMQPEDFDAVLALGEAVHGDGYLDLPHLQTLWHAGIKAGINASFVALDQNGLLGFRLTLAAGQWQPDRWC SPSLWGITPDKVCYFKSNTLAPEARGKGLGGILLQHAVDAVKAQGALGGIAHLWQESPHNAAVRYFSKAGGRLIKAHPDR WNQSHDNPDYLCTLCGNDCHCTACEMLLVFQES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21208; Mature: 21077
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPHSQVIIRQMQPEDFDAVLALGEAVHGDGYLDLPHLQTLWHAGIKAGINASFVALDQ CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCEEEEEECC NGLLGFRLTLAAGQWQPDRWCSPSLWGITPDKVCYFKSNTLAPEARGKGLGGILLQHAVD CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHH AVKAQGALGGIAHLWQESPHNAAVRYFSKAGGRLIKAHPDRWNQSHDNPDYLCTLCGNDC HHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCC HCTACEMLLVFQES CHHHEEEEEEEECC >Mature Secondary Structure TKPHSQVIIRQMQPEDFDAVLALGEAVHGDGYLDLPHLQTLWHAGIKAGINASFVALDQ CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCEEEEEECC NGLLGFRLTLAAGQWQPDRWCSPSLWGITPDKVCYFKSNTLAPEARGKGLGGILLQHAVD CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHH AVKAQGALGGIAHLWQESPHNAAVRYFSKAGGRLIKAHPDRWNQSHDNPDYLCTLCGNDC HHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCC HCTACEMLLVFQES CHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA