Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is malQ [H]

Identifier: 119775588

GI number: 119775588

Start: 2959842

End: 2962073

Strand: Reverse

Name: malQ [H]

Synonym: Sama_2454

Alternate gene names: 119775588

Gene position: 2962073-2959842 (Counterclockwise)

Preceding gene: 119775592

Following gene: 119775587

Centisome position: 68.79

GC content: 59.01

Gene sequence:

>2232_bases
ATGGGATTGGAAAAGCTCTTTTATCTGCAAGGTGTGGGAGACAGGTTCATCGACTGCGATGGCCGAGAACAAGCCATACC
CGAATCCGCTCGGTTGGCAATGCTCAAATCCCTGATGGGCCTCGAACAGTCCCCCGACGGGGCCGAAATAGCCGCCAGGG
TGGACACCCTCGACAGCCTCCCTTGGACTAAGTTGCTGCTGCCGCTGCAATGGTGTTTTGAAACCCGTCCGTCAGTTGAA
TGCCAGCTGCCTGAAAACCTGAAGCAAGACATGGAATTAACCCTGATTTCAGAGCAGGGGGAGCGTGTAACGCTGACGCT
TTTGGCAAGGGATGCCGAGACGACCGGTGATTATCAAAGGCCCGATGGCAGATACCTTCGCTGTCGCTATTCCCTGCCAA
CGCTGGCCATGGGGGAGTTTCAGCTGCAGCTGTCCCACCCTGTCCTCGGCCAGGGAAAGGGAGCCTTGCTGATTATCCCC
GAGCAGGCCTACGGTGGCCCACCGGGCCTTGGCAAGCGTCCCTGGGGCCTGGGGATAAGCCTGTTTACCCTGAGAAGCCA
GCGGCAGTGGGGCATCGGTGACCTGGCCGACCTGCAAACCCTGATAGAACTCTCCTCAGAAGTCGGGTGCGATTTTATCA
CCCTGACGCCCTTGCATGCCCCGGACATTGCCAACCCCGGACTCGCAAGCCCCTACAGCCCCTGGGACAGGCGCTTTCTC
AATCCACTCTATATCGCCATCGACTTGGTGACCGAATACAGCCAATTGGCGCAGGAGTTCAATGGCGGCGACTGGCGCCG
GGAACGCCTTATTCTCAACCAGGCAAGCCAGATTGATTACCCCAAACTTGCGCTGCTGAAGTATCGGGCGCTGGCAAAGT
TGTTCGCTGCTTTTGGAAAGCTGGATGAATTCAGCGGGCGGCGAGTGCGCTTCGAACGTTTCGTGGCCGAGGGCGGCACG
GCGCTGAAGGATTTTTGCCGTGATGTAAGCCAAAGGGCATTAAGCCTGGAGGGGGAATGGCATCGGGACCCAGCGCTGGC
AGAAGCGCTGCAACGGGACGAGTTTCATGCCTGGCTGCAGTTTGTGGCCGATGAGCAGTTGTCGCTGTGTCAGCTTCGCT
GCCGTCAGGTGGGCATGTCTCTTGGTTTGGTGAGGGATTTGGCCGTGGGCGCCCTGGCTATCGGCAGTGAAGTGAGCCGC
AGTGGCGTATTTTGCCTTAATGCCGATATCGGGGCGCCACCGGACCCCTTCGCCCGTCAGGGGCAAAACTGGGGCATGCC
GCCGATGGACCCTGTGGCGTTGAAAGACTCGGCCTTAAGCCATCTTAAATCCCTTTATCGAAGCAACATGCAAAGCTGTG
GCGCGCTCAGAATCGACCATGTGATGGCCCTGACCCGGTTGTGGTGCTGGCCAGAAGGCGATGACAACGGTTGTTACCTC
TACTATCCCCAGGAACTGATGCTGGCGGTCTTGTGCCTTGAGAGCCACAAAAACCGCTGCCTCCTGATTGGGGAGGATCT
CGGCACAGTGCCGCCGCTGCTCAAGGGCTTGCTGCGGGAGCGGGGCATTCTCGGGAACGACGTATTTTACTTTTGCCGGG
ATGGCAGCGGATTTTCCGCGCCTCGGGAGCACAGAGCCGGTGCCATGTTGCAGCTTGGCAATCAGGATGTGCCGCCATTC
ATGGCCTGGTGGCGCGGCATTGATCTCGGCTTACTCAATCAGCTTGGGCTTTTGCCGTCTGTGGAAGAGGCGCACTTGAG
CAGAGTCGCACAGTGCCGGGGTTTGCTCGAAAGCCTGGTGGAAGCCGGATGGCTGCGCCGGGAGGCCCTGACCTGGCAGC
CCTGTGATGCATTACTGCCAGCGCCAGCGGGCAATATATCGGCAGGCACTACATCGGCAGGTAACGCCACCGACAGTATT
CGTCAGGGGACGGCGGTTTTTGATGCCTTACTCAACTGGCTGCCCGGCAGCCGCGCCAAATTGTTTTCTGTCAGCCTTTG
GGATCTGGCCCTTGAATCCCAGCCCATCAATATTCCCGGCACCAGTTTTGAGTACCCCAATTGGCGTGCACGCATGAGTC
AGTCATTGGAGAGCCTTTGGCAAAGCCGCGAGTTCAGAGCGCGACTGGAAGCGATTCGCGCCGGGCGCAGTCAGCCTCAA
GGTGGGCGCCCAGGCCCGTCTGTCATAGGCGAAGCCATGGCATCTGCCGATGACAGAGAGCGCCAAAACTGA

Upstream 100 bases:

>100_bases
GTGAATCATTTTTAAGTTCATTTTGCTGAAACCAAAGTGAAGCAATCGACTGGCATGCTGTCTGCTCAGTAACCTCTATG
GTCTGGACGGAGTGTGGCAG

Downstream 100 bases:

>100_bases
AGCCTGATAACCGGATTTGATATGAAACCAGACTTGGAGAACCCCATGACCAGCGTCCAGAGCCAAGACTCAACCCTCAT
CAGTGAAGATGCCGCCCGCG

Product: 4-alpha-glucanotransferase

Products: NA

Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVE
CQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIP
EQAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL
NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGT
ALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSR
SGVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL
YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPF
MAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSI
RQGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ
GGRPGPSVIGEAMASADDRERQN

Sequences:

>Translated_743_residues
MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVE
CQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIP
EQAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL
NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGT
ALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSR
SGVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL
YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPF
MAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSI
RQGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ
GGRPGPSVIGEAMASADDRERQN
>Mature_742_residues
GLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVEC
QLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPE
QAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFLN
PLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGTA
LKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRS
GVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYLY
YPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPFM
AWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIR
QGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQG
GRPGPSVIGEAMASADDRERQN

Specific function: Unknown

COG id: COG1640

COG function: function code G; 4-alpha-glucanotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the disproportionating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI1789821, Length=579, Percent_Identity=35.7512953367876, Blast_Score=299, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003385
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02446 Glyco_hydro_77 [H]

EC number: =2.4.1.25 [H]

Molecular weight: Translated: 82494; Mature: 82363

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSL
CCHHHEEHHCCCCCCEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PWTKLLLPLQWCFETRPSVECQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQR
CHHHHHHHHHHHHCCCCCCEEECCHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCCCCC
PDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPEQAYGGPPGLGKRPWGLGIS
CCCCEEEEEECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL
EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHC
NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGK
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LDEFSGRRVRFERFVAEGGTALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQ
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRSGVFCLNADIGAPPDPFARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHC
GQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE
YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSA
EECHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PREHRAGAMLQLGNQDVPPFMAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLV
CHHHCCCCEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIRQGTAVFDALLNWLPGSRAK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE
LFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ
EEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGRPGPSVIGEAMASADDRERQN
CCCCCHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
GLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSL
CHHHEEHHCCCCCCEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PWTKLLLPLQWCFETRPSVECQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQR
CHHHHHHHHHHHHCCCCCCEEECCHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCCCCC
PDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPEQAYGGPPGLGKRPWGLGIS
CCCCEEEEEECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL
EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHC
NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGK
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LDEFSGRRVRFERFVAEGGTALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQ
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRSGVFCLNADIGAPPDPFARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHC
GQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE
YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSA
EECHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PREHRAGAMLQLGNQDVPPFMAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLV
CHHHCCCCEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIRQGTAVFDALLNWLPGSRAK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE
LFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ
EEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGRPGPSVIGEAMASADDRERQN
CCCCCHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]