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The map label for this gene is glgB [H]

Identifier: 119775587

GI number: 119775587

Start: 2957271

End: 2959796

Strand: Reverse

Name: glgB [H]

Synonym: Sama_2453

Alternate gene names: 119775587

Gene position: 2959796-2957271 (Counterclockwise)

Preceding gene: 119775588

Following gene: 119775586

Centisome position: 68.73

GC content: 58.71

Gene sequence:

>2526_bases
ATGACCAGCGTCCAGAGCCAAGACTCAACCCTCATCAGTGAAGATGCCGCCCGCGCACTGGCCCGTGGCCAGTATGTGGA
TGTCTTCTCCTTGCTGGGTATGCACGCCGACAATAACCAGCTGGTGGTGCGCTGTTTTCTGCCGGGGGCACTGGCGGTAG
AGGTGCTCAGTGCCAAAGACGGTAAAAAGGTCGCCAGTCTCAGCGCTGAGGCCCGGGAGGGCATGTTTGCCGGGGTGATG
GGGCGCAGGGTCAAGCCCTTTGCGTATCTGCTGCGGGTAGCCTACCCAAGCCATGTGGAAGATGTGTACGACCCCTATGG
CTTTGACAGCCTGCTGAGCGACTACGACCTCTACCTGTTTGGTGAGGGGCGTCAGCTTTACGCCCAGGACTTTTTGGGCG
CCAATCCCAGAGAGGTGGAGGGTGTGGCCGGGGTGCTTTTTGGCGTATGGGCGCCCAACGCCAGCCGGGTGTCTGTGGTA
GGGGATTTCAACCACTGGGATGGCCGTGTCCATGTGATGCGCTTTCATCCTGCCAGCGGTGTGTGGGACATCTTTATTCC
CGGCGTGCATGCCCATGCCCACTACAAATTCGAAATAATGACCGCCGATGGTGAGCTGCTGATTAAGTCAGACCCCTTCG
CCAAAACCATGGAAGCGGCCCCCAATAACGCATCCAGAGTCGCTCCCCAGTCATCCTTTGTCTGGCAGGATCAGGACTGG
ATGCAGGCACGGAATAAAGACTGGCATCGCCAGGCCATGTCCATTTACGAGCTGCACCTTGGCTCGTGGCGCCGTAAAGG
TGAGGCTGGTGACACCTGGCTCACCTACCGTGAGCTTGCCGATGAACTGGTGCCCTACGTGAAGTCACTGGGCTTTACGC
ACATAGAGCTGATGCCCTTGTCGGAATTCCCCTTCGATGGCTCCTGGGGCTATCAGCCGGTGGGGCTGTTTGCCCCCACA
CAGCGATTTGGCAGCAGCGACGACCTGAAATACCTGATTGATGCCTGTCACCGTGCCGGTATCGGTGTCCTGATGGATTG
GGTTATTGCCCACTTCCCGGCGGATGCCCATGGACTGGCACGCTTTGATGGCACCTGCCTGTATGAACATCAGGACCCCC
GCCGTGGCCGTCACCCTGACTGGGATACCCTGATTTTCAACTACGGCCGCGCCGAGGTGCAGAGTTTCCTGTTATCGGCC
GCCACCGTCTGGCTGCGGGATTTTCATATCGATGGGCTGCGCCTGGATGCGGTCTCTTCCATGTTGTATCTCGACTACAG
CCGCAGCGAAGGCGAGTGGCTGCCCAACGCCGATGGCGGTCGGGAAAACCATGAGGCCATTGAATGCCTCAAGCTGATAA
ACAGCCGTCTGTACGGCGAGTTTCCCGGTATCGTGATGATTGCCGAGGAATCCACCGCCTGGGATGGCGTGTGTCGCCCT
GTCAGCGAGGGCGGATTGGGGTTTGGTTTTAAGTGGAACATGGGGTGGATGAATGACACCCTGGCCTATCTTGGCAAAGA
TCCAATTCATCGCCGCTGGCATCACCATCAACTCACCTTCGGCATCATGTATGCCCACAGCGAGCAGTTTATCTTGTCGT
TAAGCCATGATGAGGTGGTCCACGGCAAGGCATCGCTGCTGTCGAAAATCCCCGGCGATGACTGGCAGAAATTTGCCACC
CTGCGTGCCTATTACGGGTATATGTGGGGTTTCCCCGGCAAGAAGCTGCTGTTTATGGGGGGCGAGTTTGGTCAGCGGGA
CGAGTGGAACCACGACAAGAGCCTCGACTGGCACCTGTTGCAGTACGCTCCCCATCAGGGGCTGAGCCTGTGGCTGGCTG
ATCTCAATCGTCTCTATCAGCGCCACACCGTACTTGGGCAAACGGATCACGACCTGTCCCGCTTCTGCTGGCTGGATTGC
GACAATGCCGAGCAGGGGATTTATGCCTTTGTCCGGGGTGAGGGCGATGATGCCCTGGTATTTGTGGTGAACATGACGCC
CCAGCTGCACCAGGGATATCGCCTGGGATTGCCCTGCGAGGGTGACTGGCGCGAGCTGCTTAACAGCGATGCCAGCTGCT
ACGGCGGCTGCAACCAGGGCAACGGCGGCGTGATTGTATGCACCCCTGAGCCCGCTGGCGGCAAGGCTCAAAGTGCTCTT
GTCACCATTCCTCCCCTGGGCTGCCTGGTGCTGGGGCTCAGCCGGGATAAATCGCCCGCGATTTCGTCTGAGTCTTCAGC
CGACAAAGCGCTACCCGTAAAAAAAGCCCCGGCCTCAACCGCCCCGGCCTTAATCAAGGCCAAGCCAGGAACCAAGACCA
AGCCAGTAACCCAGACCAAGCCAGTAACCAAGGCAAAGGCTTCTACCACTGATAACGCGCCTGCCAAAGCTAAGTCCGGC
ACCAAGCCCAGCACTAAGCCCAGCACTAAGCCCAGCACTACGCCCAGCACTAAGCCCAGTGCCAAGTCGGTGGCCAAAGC
ACCGTCCAACGCGGCAAAAACCAAAGCTGAGGATCCCGGCCTATGA

Upstream 100 bases:

>100_bases
GTCTGTCATAGGCGAAGCCATGGCATCTGCCGATGACAGAGAGCGCCAAAACTGAAGCCTGATAACCGGATTTGATATGA
AACCAGACTTGGAGAACCCC

Downstream 100 bases:

>100_bases
GCGATTTGCACCGGCAATGCGGGGTTTGGCTCTTTAACGAAGATGGCGTCAGCAAGGCGCACTTCGGGGTGTTCAGTCGC
CATGCCAGCGCTGTGTTCCT

Product: 1,4-alpha-glucan branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 841; Mature: 840

Protein sequence:

>841_residues
MTSVQSQDSTLISEDAARALARGQYVDVFSLLGMHADNNQLVVRCFLPGALAVEVLSAKDGKKVASLSAEAREGMFAGVM
GRRVKPFAYLLRVAYPSHVEDVYDPYGFDSLLSDYDLYLFGEGRQLYAQDFLGANPREVEGVAGVLFGVWAPNASRVSVV
GDFNHWDGRVHVMRFHPASGVWDIFIPGVHAHAHYKFEIMTADGELLIKSDPFAKTMEAAPNNASRVAPQSSFVWQDQDW
MQARNKDWHRQAMSIYELHLGSWRRKGEAGDTWLTYRELADELVPYVKSLGFTHIELMPLSEFPFDGSWGYQPVGLFAPT
QRFGSSDDLKYLIDACHRAGIGVLMDWVIAHFPADAHGLARFDGTCLYEHQDPRRGRHPDWDTLIFNYGRAEVQSFLLSA
ATVWLRDFHIDGLRLDAVSSMLYLDYSRSEGEWLPNADGGRENHEAIECLKLINSRLYGEFPGIVMIAEESTAWDGVCRP
VSEGGLGFGFKWNMGWMNDTLAYLGKDPIHRRWHHHQLTFGIMYAHSEQFILSLSHDEVVHGKASLLSKIPGDDWQKFAT
LRAYYGYMWGFPGKKLLFMGGEFGQRDEWNHDKSLDWHLLQYAPHQGLSLWLADLNRLYQRHTVLGQTDHDLSRFCWLDC
DNAEQGIYAFVRGEGDDALVFVVNMTPQLHQGYRLGLPCEGDWRELLNSDASCYGGCNQGNGGVIVCTPEPAGGKAQSAL
VTIPPLGCLVLGLSRDKSPAISSESSADKALPVKKAPASTAPALIKAKPGTKTKPVTQTKPVTKAKASTTDNAPAKAKSG
TKPSTKPSTKPSTTPSTKPSAKSVAKAPSNAAKTKAEDPGL

Sequences:

>Translated_841_residues
MTSVQSQDSTLISEDAARALARGQYVDVFSLLGMHADNNQLVVRCFLPGALAVEVLSAKDGKKVASLSAEAREGMFAGVM
GRRVKPFAYLLRVAYPSHVEDVYDPYGFDSLLSDYDLYLFGEGRQLYAQDFLGANPREVEGVAGVLFGVWAPNASRVSVV
GDFNHWDGRVHVMRFHPASGVWDIFIPGVHAHAHYKFEIMTADGELLIKSDPFAKTMEAAPNNASRVAPQSSFVWQDQDW
MQARNKDWHRQAMSIYELHLGSWRRKGEAGDTWLTYRELADELVPYVKSLGFTHIELMPLSEFPFDGSWGYQPVGLFAPT
QRFGSSDDLKYLIDACHRAGIGVLMDWVIAHFPADAHGLARFDGTCLYEHQDPRRGRHPDWDTLIFNYGRAEVQSFLLSA
ATVWLRDFHIDGLRLDAVSSMLYLDYSRSEGEWLPNADGGRENHEAIECLKLINSRLYGEFPGIVMIAEESTAWDGVCRP
VSEGGLGFGFKWNMGWMNDTLAYLGKDPIHRRWHHHQLTFGIMYAHSEQFILSLSHDEVVHGKASLLSKIPGDDWQKFAT
LRAYYGYMWGFPGKKLLFMGGEFGQRDEWNHDKSLDWHLLQYAPHQGLSLWLADLNRLYQRHTVLGQTDHDLSRFCWLDC
DNAEQGIYAFVRGEGDDALVFVVNMTPQLHQGYRLGLPCEGDWRELLNSDASCYGGCNQGNGGVIVCTPEPAGGKAQSAL
VTIPPLGCLVLGLSRDKSPAISSESSADKALPVKKAPASTAPALIKAKPGTKTKPVTQTKPVTKAKASTTDNAPAKAKSG
TKPSTKPSTKPSTTPSTKPSAKSVAKAPSNAAKTKAEDPGL
>Mature_840_residues
TSVQSQDSTLISEDAARALARGQYVDVFSLLGMHADNNQLVVRCFLPGALAVEVLSAKDGKKVASLSAEAREGMFAGVMG
RRVKPFAYLLRVAYPSHVEDVYDPYGFDSLLSDYDLYLFGEGRQLYAQDFLGANPREVEGVAGVLFGVWAPNASRVSVVG
DFNHWDGRVHVMRFHPASGVWDIFIPGVHAHAHYKFEIMTADGELLIKSDPFAKTMEAAPNNASRVAPQSSFVWQDQDWM
QARNKDWHRQAMSIYELHLGSWRRKGEAGDTWLTYRELADELVPYVKSLGFTHIELMPLSEFPFDGSWGYQPVGLFAPTQ
RFGSSDDLKYLIDACHRAGIGVLMDWVIAHFPADAHGLARFDGTCLYEHQDPRRGRHPDWDTLIFNYGRAEVQSFLLSAA
TVWLRDFHIDGLRLDAVSSMLYLDYSRSEGEWLPNADGGRENHEAIECLKLINSRLYGEFPGIVMIAEESTAWDGVCRPV
SEGGLGFGFKWNMGWMNDTLAYLGKDPIHRRWHHHQLTFGIMYAHSEQFILSLSHDEVVHGKASLLSKIPGDDWQKFATL
RAYYGYMWGFPGKKLLFMGGEFGQRDEWNHDKSLDWHLLQYAPHQGLSLWLADLNRLYQRHTVLGQTDHDLSRFCWLDCD
NAEQGIYAFVRGEGDDALVFVVNMTPQLHQGYRLGLPCEGDWRELLNSDASCYGGCNQGNGGVIVCTPEPAGGKAQSALV
TIPPLGCLVLGLSRDKSPAISSESSADKALPVKKAPASTAPALIKAKPGTKTKPVTQTKPVTKAKASTTDNAPAKAKSGT
KPSTKPSTKPSTTPSTKPSAKSVAKAPSNAAKTKAEDPGL

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=635, Percent_Identity=27.7165354330709, Blast_Score=187, Evalue=3e-47,
Organism=Escherichia coli, GI1789839, Length=726, Percent_Identity=50.5509641873278, Blast_Score=735, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=625, Percent_Identity=27.52, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI32564391, Length=611, Percent_Identity=26.8412438625205, Blast_Score=175, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6320826, Length=670, Percent_Identity=27.910447761194, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI28573410, Length=653, Percent_Identity=28.7901990811639, Blast_Score=196, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 93137; Mature: 93006

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVQSQDSTLISEDAARALARGQYVDVFSLLGMHADNNQLVVRCFLPGALAVEVLSAKD
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCC
GKKVASLSAEAREGMFAGVMGRRVKPFAYLLRVAYPSHVEDVYDPYGFDSLLSDYDLYLF
CCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCCEEEE
GEGRQLYAQDFLGANPREVEGVAGVLFGVWAPNASRVSVVGDFNHWDGRVHVMRFHPASG
ECCCHHHHHHHCCCCCHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCC
VWDIFIPGVHAHAHYKFEIMTADGELLIKSDPFAKTMEAAPNNASRVAPQSSFVWQDQDW
EEEEEECCEEEEEEEEEEEEECCCCEEEECCCCHHHHHCCCCCCHHCCCCCCEEECCHHH
MQARNKDWHRQAMSIYELHLGSWRRKGEAGDTWLTYRELADELVPYVKSLGFTHIELMPL
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLFAPTQRFGSSDDLKYLIDACHRAGIGVLMDWVIAHFPADAHGLA
CCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHH
RFDGTCLYEHQDPRRGRHPDWDTLIFNYGRAEVQSFLLSAATVWLRDFHIDGLRLDAVSS
HCCCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSRSEGEWLPNADGGRENHEAIECLKLINSRLYGEFPGIVMIAEESTAWDGVCRP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
VSEGGLGFGFKWNMGWMNDTLAYLGKDPIHRRWHHHQLTFGIMYAHSEQFILSLSHDEVV
CCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHCCCEEEEEEEEECCCEEEEEECCCHHH
HGKASLLSKIPGDDWQKFATLRAYYGYMWGFPGKKLLFMGGEFGQRDEWNHDKSLDWHLL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
QYAPHQGLSLWLADLNRLYQRHTVLGQTDHDLSRFCWLDCDNAEQGIYAFVRGEGDDALV
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEE
FVVNMTPQLHQGYRLGLPCEGDWRELLNSDASCYGGCNQGNGGVIVCTPEPAGGKAQSAL
EEEECCHHHHCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE
VTIPPLGCLVLGLSRDKSPAISSESSADKALPVKKAPASTAPALIKAKPGTKTKPVTQTK
EEECCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PVTKAKASTTDNAPAKAKSGTKPSTKPSTKPSTTPSTKPSAKSVAKAPSNAAKTKAEDPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCC
L
C
>Mature Secondary Structure 
TSVQSQDSTLISEDAARALARGQYVDVFSLLGMHADNNQLVVRCFLPGALAVEVLSAKD
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCC
GKKVASLSAEAREGMFAGVMGRRVKPFAYLLRVAYPSHVEDVYDPYGFDSLLSDYDLYLF
CCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCCEEEE
GEGRQLYAQDFLGANPREVEGVAGVLFGVWAPNASRVSVVGDFNHWDGRVHVMRFHPASG
ECCCHHHHHHHCCCCCHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCC
VWDIFIPGVHAHAHYKFEIMTADGELLIKSDPFAKTMEAAPNNASRVAPQSSFVWQDQDW
EEEEEECCEEEEEEEEEEEEECCCCEEEECCCCHHHHHCCCCCCHHCCCCCCEEECCHHH
MQARNKDWHRQAMSIYELHLGSWRRKGEAGDTWLTYRELADELVPYVKSLGFTHIELMPL
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLFAPTQRFGSSDDLKYLIDACHRAGIGVLMDWVIAHFPADAHGLA
CCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHH
RFDGTCLYEHQDPRRGRHPDWDTLIFNYGRAEVQSFLLSAATVWLRDFHIDGLRLDAVSS
HCCCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSRSEGEWLPNADGGRENHEAIECLKLINSRLYGEFPGIVMIAEESTAWDGVCRP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
VSEGGLGFGFKWNMGWMNDTLAYLGKDPIHRRWHHHQLTFGIMYAHSEQFILSLSHDEVV
CCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHCCCEEEEEEEEECCCEEEEEECCCHHH
HGKASLLSKIPGDDWQKFATLRAYYGYMWGFPGKKLLFMGGEFGQRDEWNHDKSLDWHLL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
QYAPHQGLSLWLADLNRLYQRHTVLGQTDHDLSRFCWLDCDNAEQGIYAFVRGEGDDALV
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEE
FVVNMTPQLHQGYRLGLPCEGDWRELLNSDASCYGGCNQGNGGVIVCTPEPAGGKAQSAL
EEEECCHHHHCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE
VTIPPLGCLVLGLSRDKSPAISSESSADKALPVKKAPASTAPALIKAKPGTKTKPVTQTK
EEECCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PVTKAKASTTDNAPAKAKSGTKPSTKPSTKPSTTPSTKPSAKSVAKAPSNAAKTKAEDPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA