| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is malQ [H]
Identifier: 119775588
GI number: 119775588
Start: 2959842
End: 2962073
Strand: Reverse
Name: malQ [H]
Synonym: Sama_2454
Alternate gene names: 119775588
Gene position: 2962073-2959842 (Counterclockwise)
Preceding gene: 119775592
Following gene: 119775587
Centisome position: 68.79
GC content: 59.01
Gene sequence:
>2232_bases ATGGGATTGGAAAAGCTCTTTTATCTGCAAGGTGTGGGAGACAGGTTCATCGACTGCGATGGCCGAGAACAAGCCATACC CGAATCCGCTCGGTTGGCAATGCTCAAATCCCTGATGGGCCTCGAACAGTCCCCCGACGGGGCCGAAATAGCCGCCAGGG TGGACACCCTCGACAGCCTCCCTTGGACTAAGTTGCTGCTGCCGCTGCAATGGTGTTTTGAAACCCGTCCGTCAGTTGAA TGCCAGCTGCCTGAAAACCTGAAGCAAGACATGGAATTAACCCTGATTTCAGAGCAGGGGGAGCGTGTAACGCTGACGCT TTTGGCAAGGGATGCCGAGACGACCGGTGATTATCAAAGGCCCGATGGCAGATACCTTCGCTGTCGCTATTCCCTGCCAA CGCTGGCCATGGGGGAGTTTCAGCTGCAGCTGTCCCACCCTGTCCTCGGCCAGGGAAAGGGAGCCTTGCTGATTATCCCC GAGCAGGCCTACGGTGGCCCACCGGGCCTTGGCAAGCGTCCCTGGGGCCTGGGGATAAGCCTGTTTACCCTGAGAAGCCA GCGGCAGTGGGGCATCGGTGACCTGGCCGACCTGCAAACCCTGATAGAACTCTCCTCAGAAGTCGGGTGCGATTTTATCA CCCTGACGCCCTTGCATGCCCCGGACATTGCCAACCCCGGACTCGCAAGCCCCTACAGCCCCTGGGACAGGCGCTTTCTC AATCCACTCTATATCGCCATCGACTTGGTGACCGAATACAGCCAATTGGCGCAGGAGTTCAATGGCGGCGACTGGCGCCG GGAACGCCTTATTCTCAACCAGGCAAGCCAGATTGATTACCCCAAACTTGCGCTGCTGAAGTATCGGGCGCTGGCAAAGT TGTTCGCTGCTTTTGGAAAGCTGGATGAATTCAGCGGGCGGCGAGTGCGCTTCGAACGTTTCGTGGCCGAGGGCGGCACG GCGCTGAAGGATTTTTGCCGTGATGTAAGCCAAAGGGCATTAAGCCTGGAGGGGGAATGGCATCGGGACCCAGCGCTGGC AGAAGCGCTGCAACGGGACGAGTTTCATGCCTGGCTGCAGTTTGTGGCCGATGAGCAGTTGTCGCTGTGTCAGCTTCGCT GCCGTCAGGTGGGCATGTCTCTTGGTTTGGTGAGGGATTTGGCCGTGGGCGCCCTGGCTATCGGCAGTGAAGTGAGCCGC AGTGGCGTATTTTGCCTTAATGCCGATATCGGGGCGCCACCGGACCCCTTCGCCCGTCAGGGGCAAAACTGGGGCATGCC GCCGATGGACCCTGTGGCGTTGAAAGACTCGGCCTTAAGCCATCTTAAATCCCTTTATCGAAGCAACATGCAAAGCTGTG GCGCGCTCAGAATCGACCATGTGATGGCCCTGACCCGGTTGTGGTGCTGGCCAGAAGGCGATGACAACGGTTGTTACCTC TACTATCCCCAGGAACTGATGCTGGCGGTCTTGTGCCTTGAGAGCCACAAAAACCGCTGCCTCCTGATTGGGGAGGATCT CGGCACAGTGCCGCCGCTGCTCAAGGGCTTGCTGCGGGAGCGGGGCATTCTCGGGAACGACGTATTTTACTTTTGCCGGG ATGGCAGCGGATTTTCCGCGCCTCGGGAGCACAGAGCCGGTGCCATGTTGCAGCTTGGCAATCAGGATGTGCCGCCATTC ATGGCCTGGTGGCGCGGCATTGATCTCGGCTTACTCAATCAGCTTGGGCTTTTGCCGTCTGTGGAAGAGGCGCACTTGAG CAGAGTCGCACAGTGCCGGGGTTTGCTCGAAAGCCTGGTGGAAGCCGGATGGCTGCGCCGGGAGGCCCTGACCTGGCAGC CCTGTGATGCATTACTGCCAGCGCCAGCGGGCAATATATCGGCAGGCACTACATCGGCAGGTAACGCCACCGACAGTATT CGTCAGGGGACGGCGGTTTTTGATGCCTTACTCAACTGGCTGCCCGGCAGCCGCGCCAAATTGTTTTCTGTCAGCCTTTG GGATCTGGCCCTTGAATCCCAGCCCATCAATATTCCCGGCACCAGTTTTGAGTACCCCAATTGGCGTGCACGCATGAGTC AGTCATTGGAGAGCCTTTGGCAAAGCCGCGAGTTCAGAGCGCGACTGGAAGCGATTCGCGCCGGGCGCAGTCAGCCTCAA GGTGGGCGCCCAGGCCCGTCTGTCATAGGCGAAGCCATGGCATCTGCCGATGACAGAGAGCGCCAAAACTGA
Upstream 100 bases:
>100_bases GTGAATCATTTTTAAGTTCATTTTGCTGAAACCAAAGTGAAGCAATCGACTGGCATGCTGTCTGCTCAGTAACCTCTATG GTCTGGACGGAGTGTGGCAG
Downstream 100 bases:
>100_bases AGCCTGATAACCGGATTTGATATGAAACCAGACTTGGAGAACCCCATGACCAGCGTCCAGAGCCAAGACTCAACCCTCAT CAGTGAAGATGCCGCCCGCG
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVE CQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIP EQAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGT ALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSR SGVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPF MAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSI RQGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ GGRPGPSVIGEAMASADDRERQN
Sequences:
>Translated_743_residues MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVE CQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIP EQAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGT ALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSR SGVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPF MAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSI RQGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ GGRPGPSVIGEAMASADDRERQN >Mature_742_residues GLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSLPWTKLLLPLQWCFETRPSVEC QLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQRPDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPE QAYGGPPGLGKRPWGLGISLFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFLN PLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGKLDEFSGRRVRFERFVAEGGTA LKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQFVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRS GVFCLNADIGAPPDPFARQGQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYLY YPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSAPREHRAGAMLQLGNQDVPPFM AWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLVEAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIR QGTAVFDALLNWLPGSRAKLFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQG GRPGPSVIGEAMASADDRERQN
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=579, Percent_Identity=35.7512953367876, Blast_Score=299, Evalue=4e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 82494; Mature: 82363
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSL CCHHHEEHHCCCCCCEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC PWTKLLLPLQWCFETRPSVECQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQR CHHHHHHHHHHHHCCCCCCEEECCHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCCCCC PDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPEQAYGGPPGLGKRPWGLGIS CCCCEEEEEECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE LFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHC NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGK CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC LDEFSGRRVRFERFVAEGGTALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQ HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRSGVFCLNADIGAPPDPFARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHC GQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSA EECHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC PREHRAGAMLQLGNQDVPPFMAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLV CHHHCCCCEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIRQGTAVFDALLNWLPGSRAK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE LFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ EEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGRPGPSVIGEAMASADDRERQN CCCCCHHHHHHHHHCCCHHHCCC >Mature Secondary Structure GLEKLFYLQGVGDRFIDCDGREQAIPESARLAMLKSLMGLEQSPDGAEIAARVDTLDSL CHHHEEHHCCCCCCEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC PWTKLLLPLQWCFETRPSVECQLPENLKQDMELTLISEQGERVTLTLLARDAETTGDYQR CHHHHHHHHHHHHCCCCCCEEECCHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCCCCC PDGRYLRCRYSLPTLAMGEFQLQLSHPVLGQGKGALLIIPEQAYGGPPGLGKRPWGLGIS CCCCEEEEEECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE LFTLRSQRQWGIGDLADLQTLIELSSEVGCDFITLTPLHAPDIANPGLASPYSPWDRRFL EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHC NPLYIAIDLVTEYSQLAQEFNGGDWRRERLILNQASQIDYPKLALLKYRALAKLFAAFGK CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC LDEFSGRRVRFERFVAEGGTALKDFCRDVSQRALSLEGEWHRDPALAEALQRDEFHAWLQ HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FVADEQLSLCQLRCRQVGMSLGLVRDLAVGALAIGSEVSRSGVFCLNADIGAPPDPFARQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHC GQNWGMPPMDPVALKDSALSHLKSLYRSNMQSCGALRIDHVMALTRLWCWPEGDDNGCYL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE YYPQELMLAVLCLESHKNRCLLIGEDLGTVPPLLKGLLRERGILGNDVFYFCRDGSGFSA EECHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC PREHRAGAMLQLGNQDVPPFMAWWRGIDLGLLNQLGLLPSVEEAHLSRVAQCRGLLESLV CHHHCCCCEEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EAGWLRREALTWQPCDALLPAPAGNISAGTTSAGNATDSIRQGTAVFDALLNWLPGSRAK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE LFSVSLWDLALESQPINIPGTSFEYPNWRARMSQSLESLWQSREFRARLEAIRAGRSQPQ EEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGRPGPSVIGEAMASADDRERQN CCCCCHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]