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The map label for this gene is 119775578

Identifier: 119775578

GI number: 119775578

Start: 2941204

End: 2942289

Strand: Reverse

Name: 119775578

Synonym: Sama_2444

Alternate gene names: NA

Gene position: 2942289-2941204 (Counterclockwise)

Preceding gene: 119775579

Following gene: 119775571

Centisome position: 68.33

GC content: 50.74

Gene sequence:

>1086_bases
ATGAAAACAATAGGGAAAATTGCACCGCTCCTTCTCGCCCTCAGTACCGTATCTCCTCTGGTCTTGGCCGATGAGTTTTC
TGATGTTTATCGCAGTTACCAACAGGCTTGGGAAAGTGGCAACAACATTGAGGCACGCGGTTTTGCCGAGAAGGCCTATT
CATTGGGTGAGGCGAAATTTGGCAAAGACAGTGTGGATTATGCCAACCTAGGATTGAATCTTGCCAAGGCGCTCAGAAGC
GACAATTCGGGTGATTTTGCGGTCAATCGTCAGCGTGCCACTGAGATTGCGACACTCAGCCTGGCGAGCTATGAAGCGCG
ATTTGGCGAAGAGGCCACAGATCTGATTGATCCTCTGATGGTGCTTGGTGATGTGACCCAAGACAGTAAAACCGCGAGGA
AAGCCTACCAAAGAGCTTTGAACATTGCCAAAGACTCGGGTAAGGGGGATCTGCTGGCCTATACCCGTATGAATGCCTTT
AAGCGGTTGGCGAGAACTGAGTATTACACGTCAGCGGTTTATGGCTATATCCGCGATGCCCATGAGTATTTTGCCCAACA
CCGTCCCGCCAATAGTGCTGTCAGATTGGAGGCCACTTACCTGTTGGCTGGTGCTCATATGGGCAATGCTAAATACAGAA
AGGCAGAACCCTTATATCTTGAGGTGATAGAGCAGTATAAGGTGCTTGATTACACCCATCCCTATGCCCTGGGCGCCCAC
AGTCGTCTTGTTGAGCTGTATGAGCGTATGGGCAAATCTGAACTTTCCACCGAACACTGTATTGCCATTGGCAGCATGAA
GCCCTGGGATGATAATCAGGAGCAGACGCCACTGTTCCGTAAGAATCCTGAGTTTCCAATGGAGCTTGTCAGACGAGGCA
AGAGTGGCTGGGCTGAAATCAGCTTTACGGTAGATGAAATGGGTATGGTTCGCGACCCCAAAGTGCTCGACTCAGAAGGT
GGCAAGGGTTTTGAAAAGGCCTCAATGGAGGCTCTCAGCGCCTGGCGCTATGCCCCCAAGTTTGAAGATGGCAAGCCGGT
AAAAGCCGAAAGCTCAGTCAGGCTGGACTTTCGGGTAGAGCGATAA

Upstream 100 bases:

>100_bases
ACCGCGGTAGTTGTTAATTGGTGGTGGTTGGTCGCTGGCGGAGATTGTGGTAGTTTCCAATATTGTGTTGTGGTGAAACA
GATAAAAGGAAATTATAACG

Downstream 100 bases:

>100_bases
CATCAATAAAAAAACGCCGCATAAATGCGGCGTTTTTTGTTGCTAAAGGAAGTGTCCACTACACCAGATATAAACTCAGG
CTGCAGGCGCCGTGAGCACC

Product: TonB domain-containing protein

Products: NA

Alternate protein names: NB Domain-Containing Protein; NB2 Protein; NB Protein; NB-Like Protein; NB Domain Protein; NB-Like Periplasmic Protein; Outer Membrane Transport Energization Protein nB

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKTIGKIAPLLLALSTVSPLVLADEFSDVYRSYQQAWESGNNIEARGFAEKAYSLGEAKFGKDSVDYANLGLNLAKALRS
DNSGDFAVNRQRATEIATLSLASYEARFGEEATDLIDPLMVLGDVTQDSKTARKAYQRALNIAKDSGKGDLLAYTRMNAF
KRLARTEYYTSAVYGYIRDAHEYFAQHRPANSAVRLEATYLLAGAHMGNAKYRKAEPLYLEVIEQYKVLDYTHPYALGAH
SRLVELYERMGKSELSTEHCIAIGSMKPWDDNQEQTPLFRKNPEFPMELVRRGKSGWAEISFTVDEMGMVRDPKVLDSEG
GKGFEKASMEALSAWRYAPKFEDGKPVKAESSVRLDFRVER

Sequences:

>Translated_361_residues
MKTIGKIAPLLLALSTVSPLVLADEFSDVYRSYQQAWESGNNIEARGFAEKAYSLGEAKFGKDSVDYANLGLNLAKALRS
DNSGDFAVNRQRATEIATLSLASYEARFGEEATDLIDPLMVLGDVTQDSKTARKAYQRALNIAKDSGKGDLLAYTRMNAF
KRLARTEYYTSAVYGYIRDAHEYFAQHRPANSAVRLEATYLLAGAHMGNAKYRKAEPLYLEVIEQYKVLDYTHPYALGAH
SRLVELYERMGKSELSTEHCIAIGSMKPWDDNQEQTPLFRKNPEFPMELVRRGKSGWAEISFTVDEMGMVRDPKVLDSEG
GKGFEKASMEALSAWRYAPKFEDGKPVKAESSVRLDFRVER
>Mature_361_residues
MKTIGKIAPLLLALSTVSPLVLADEFSDVYRSYQQAWESGNNIEARGFAEKAYSLGEAKFGKDSVDYANLGLNLAKALRS
DNSGDFAVNRQRATEIATLSLASYEARFGEEATDLIDPLMVLGDVTQDSKTARKAYQRALNIAKDSGKGDLLAYTRMNAF
KRLARTEYYTSAVYGYIRDAHEYFAQHRPANSAVRLEATYLLAGAHMGNAKYRKAEPLYLEVIEQYKVLDYTHPYALGAH
SRLVELYERMGKSELSTEHCIAIGSMKPWDDNQEQTPLFRKNPEFPMELVRRGKSGWAEISFTVDEMGMVRDPKVLDSEG
GKGFEKASMEALSAWRYAPKFEDGKPVKAESSVRLDFRVER

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40529; Mature: 40529

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGKIAPLLLALSTVSPLVLADEFSDVYRSYQQAWESGNNIEARGFAEKAYSLGEAKF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
GKDSVDYANLGLNLAKALRSDNSGDFAVNRQRATEIATLSLASYEARFGEEATDLIDPLM
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLGDVTQDSKTARKAYQRALNIAKDSGKGDLLAYTRMNAFKRLARTEYYTSAVYGYIRDA
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEYFAQHRPANSAVRLEATYLLAGAHMGNAKYRKAEPLYLEVIEQYKVLDYTHPYALGAH
HHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCHH
SRLVELYERMGKSELSTEHCIAIGSMKPWDDNQEQTPLFRKNPEFPMELVRRGKSGWAEI
HHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEE
SFTVDEMGMVRDPKVLDSEGGKGFEKASMEALSAWRYAPKFEDGKPVKAESSVRLDFRVE
EEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
R
C
>Mature Secondary Structure
MKTIGKIAPLLLALSTVSPLVLADEFSDVYRSYQQAWESGNNIEARGFAEKAYSLGEAKF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
GKDSVDYANLGLNLAKALRSDNSGDFAVNRQRATEIATLSLASYEARFGEEATDLIDPLM
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLGDVTQDSKTARKAYQRALNIAKDSGKGDLLAYTRMNAFKRLARTEYYTSAVYGYIRDA
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEYFAQHRPANSAVRLEATYLLAGAHMGNAKYRKAEPLYLEVIEQYKVLDYTHPYALGAH
HHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCHH
SRLVELYERMGKSELSTEHCIAIGSMKPWDDNQEQTPLFRKNPEFPMELVRRGKSGWAEI
HHHHHHHHHHCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEE
SFTVDEMGMVRDPKVLDSEGGKGFEKASMEALSAWRYAPKFEDGKPVKAESSVRLDFRVE
EEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA