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The map label for this gene is yfcC [H]

Identifier: 119775526

GI number: 119775526

Start: 2872278

End: 2873732

Strand: Reverse

Name: yfcC [H]

Synonym: Sama_2392

Alternate gene names: 119775526

Gene position: 2873732-2872278 (Counterclockwise)

Preceding gene: 119775527

Following gene: 119775525

Centisome position: 66.74

GC content: 56.84

Gene sequence:

>1455_bases
ATGTCTTTATCCAAACGGGAAATGCCGGATGCCTTCATCATCCTGATGTTGATGATGCTGCTGGCATGGGGCCTGACCTT
TATCGTGCCGGCAGGCCAGTTTATGTGGGTGACCGAGCAGGGGATCCGGCTTGAAAATTTCAGCCTTCAGGCAAACGAGG
GGCTTGGCAGCGCGCTTTTCAGTGCAAACGGAACCCCTGGGCTGCTCAATTCAGCATTTGATGGGCTCACCTCCGGCGGG
CGCGACAGCTCTGCCGTTGGTGTGGTGGCCTTTATTCTGATTGTGGGCGGCGCTTTTGGTGTGCTGCTGGCAAGTGGCGC
GGTGCATCAGGCGCTGATGCTGCTGATAGCGCGCCTTAAAGAGCGAGAAGCCCTGTTGCTGCCGGTGCTGTTTGTGGTGT
TTTCGCTGAGCGGCGCCGTGTACGGCATGAGCGAGGAGGCGATTGCCTTTTGCCTGCTGCTGATGCCGCTTTTCAGTGCC
CTGGGGTATCATCCTGCCGTGGTGGTGCTGGTAACCTACGTGGCCACCCAGGTCGGCTTTGCCACCTCCTGGATGAATCC
CTTCAGTGTGGCCATTGCCCAGGGAATAGCTGGCTTGCCATTGATGTCGGGGGCGTGGCTTCGGGCCCTGTGCTGGGGGA
TTTTTACCCTCTGCGCCCTGGTGTATACGCTGCGTTTTGCCAAACACACGCGCCGCCAGACTTTGGCTCTGGCAGCGGCT
CCGACAGCGGATGCAAGTGTTACTCAGTCCCTGATGGCAGAGCCAAAACCAAAGCAGACGAGCCTTAGCAAGGTCAATGT
CGCCATTTTGCTGATTTTACTGCTGACATTGGTTTGGGTGATTTGGGGAGTGGTGGCAGGGGGGTACTATATTGCCCAGA
TTGCCAGCCAGTTCTTTGCCATGGCGATGGCGATTGGCTTGCTGCTGTGGCTCAGTGGCACCATGACTTTGAATCAGGTC
TCCGGCGCCTTTCAGCGCGGCGCCGCCGAGCTGTTGCCTGCGGCGCTGATAGTGGGCTTTGCCAAGGGGCTGGTTATTCT
GCTTGGCGGTGACAATCCGTCGGCGCCTTCGGTGCTCAATACCTTGCTGTACTCAGCGGGTGGCAGTATCGGACACTTGC
CTGACTGGCTCTCGGCACAAATGATGCTGGTGTTTCAGTCGGTATTTAATGTGTTTGTGTCGTCTGGTTCCGGCCAGGCT
GCGCTGACCATGCCATTGATGTCACCGCTGGCGGAGCTTGCCGGGCTCAGCAGACAGCTGGCTGTGCTGTGTTTTCAGTT
GGGTGACGGACTGACCAACCTGATTATTCCAACCTCAGCCTCTCTGATGGGCTGTTTGGGTGTAGTCAAAATCTCCTTTG
GACAGTGGCTTAAATTGATTTGGCGATTACAGGTGCTGCTGATGACTCTGGCCAGTGCTGCTGTGGGTATTGCCGTTTAT
ACAGGATATAGCTGA

Upstream 100 bases:

>100_bases
ATGACTGGCTCGGTCAGCGCTGGAACCTGCGTTATAGCCTGCGCTTCTGATGTTCTCCCTGGCCGGGCTTGCCCGGCCAT
TTTTCATTGTGGGAGGACCT

Downstream 100 bases:

>100_bases
TGTTAACTTTGATCAGAAATGCCAACCTTTTTACGCCTTCAGCGGTTGGTTTACAGGATGTGCTTTTTGGCACTGGTGGC
GTTATCACCATCGCAGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSLSKREMPDAFIILMLMMLLAWGLTFIVPAGQFMWVTEQGIRLENFSLQANEGLGSALFSANGTPGLLNSAFDGLTSGG
RDSSAVGVVAFILIVGGAFGVLLASGAVHQALMLLIARLKEREALLLPVLFVVFSLSGAVYGMSEEAIAFCLLLMPLFSA
LGYHPAVVVLVTYVATQVGFATSWMNPFSVAIAQGIAGLPLMSGAWLRALCWGIFTLCALVYTLRFAKHTRRQTLALAAA
PTADASVTQSLMAEPKPKQTSLSKVNVAILLILLLTLVWVIWGVVAGGYYIAQIASQFFAMAMAIGLLLWLSGTMTLNQV
SGAFQRGAAELLPAALIVGFAKGLVILLGGDNPSAPSVLNTLLYSAGGSIGHLPDWLSAQMMLVFQSVFNVFVSSGSGQA
ALTMPLMSPLAELAGLSRQLAVLCFQLGDGLTNLIIPTSASLMGCLGVVKISFGQWLKLIWRLQVLLMTLASAAVGIAVY
TGYS

Sequences:

>Translated_484_residues
MSLSKREMPDAFIILMLMMLLAWGLTFIVPAGQFMWVTEQGIRLENFSLQANEGLGSALFSANGTPGLLNSAFDGLTSGG
RDSSAVGVVAFILIVGGAFGVLLASGAVHQALMLLIARLKEREALLLPVLFVVFSLSGAVYGMSEEAIAFCLLLMPLFSA
LGYHPAVVVLVTYVATQVGFATSWMNPFSVAIAQGIAGLPLMSGAWLRALCWGIFTLCALVYTLRFAKHTRRQTLALAAA
PTADASVTQSLMAEPKPKQTSLSKVNVAILLILLLTLVWVIWGVVAGGYYIAQIASQFFAMAMAIGLLLWLSGTMTLNQV
SGAFQRGAAELLPAALIVGFAKGLVILLGGDNPSAPSVLNTLLYSAGGSIGHLPDWLSAQMMLVFQSVFNVFVSSGSGQA
ALTMPLMSPLAELAGLSRQLAVLCFQLGDGLTNLIIPTSASLMGCLGVVKISFGQWLKLIWRLQVLLMTLASAAVGIAVY
TGYS
>Mature_483_residues
SLSKREMPDAFIILMLMMLLAWGLTFIVPAGQFMWVTEQGIRLENFSLQANEGLGSALFSANGTPGLLNSAFDGLTSGGR
DSSAVGVVAFILIVGGAFGVLLASGAVHQALMLLIARLKEREALLLPVLFVVFSLSGAVYGMSEEAIAFCLLLMPLFSAL
GYHPAVVVLVTYVATQVGFATSWMNPFSVAIAQGIAGLPLMSGAWLRALCWGIFTLCALVYTLRFAKHTRRQTLALAAAP
TADASVTQSLMAEPKPKQTSLSKVNVAILLILLLTLVWVIWGVVAGGYYIAQIASQFFAMAMAIGLLLWLSGTMTLNQVS
GAFQRGAAELLPAALIVGFAKGLVILLGGDNPSAPSVLNTLLYSAGGSIGHLPDWLSAQMMLVFQSVFNVFVSSGSGQAA
LTMPLMSPLAELAGLSRQLAVLCFQLGDGLTNLIIPTSASLMGCLGVVKISFGQWLKLIWRLQVLLMTLASAAVGIAVYT
GYS

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=498, Percent_Identity=41.1646586345382, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51036; Mature: 50905

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKREMPDAFIILMLMMLLAWGLTFIVPAGQFMWVTEQGIRLENFSLQANEGLGSALF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCEECCCCCCHHHH
SANGTPGLLNSAFDGLTSGGRDSSAVGVVAFILIVGGAFGVLLASGAVHQALMLLIARLK
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EREALLLPVLFVVFSLSGAVYGMSEEAIAFCLLLMPLFSALGYHPAVVVLVTYVATQVGF
HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ATSWMNPFSVAIAQGIAGLPLMSGAWLRALCWGIFTLCALVYTLRFAKHTRRQTLALAAA
HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PTADASVTQSLMAEPKPKQTSLSKVNVAILLILLLTLVWVIWGVVAGGYYIAQIASQFFA
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAMAIGLLLWLSGTMTLNQVSGAFQRGAAELLPAALIVGFAKGLVILLGGDNPSAPSVLN
HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
TLLYSAGGSIGHLPDWLSAQMMLVFQSVFNVFVSSGSGQAALTMPLMSPLAELAGLSRQL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHH
AVLCFQLGDGLTNLIIPTSASLMGCLGVVKISFGQWLKLIWRLQVLLMTLASAAVGIAVY
HHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
TGYS
CCCC
>Mature Secondary Structure 
SLSKREMPDAFIILMLMMLLAWGLTFIVPAGQFMWVTEQGIRLENFSLQANEGLGSALF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCEECCCCCCHHHH
SANGTPGLLNSAFDGLTSGGRDSSAVGVVAFILIVGGAFGVLLASGAVHQALMLLIARLK
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EREALLLPVLFVVFSLSGAVYGMSEEAIAFCLLLMPLFSALGYHPAVVVLVTYVATQVGF
HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ATSWMNPFSVAIAQGIAGLPLMSGAWLRALCWGIFTLCALVYTLRFAKHTRRQTLALAAA
HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PTADASVTQSLMAEPKPKQTSLSKVNVAILLILLLTLVWVIWGVVAGGYYIAQIASQFFA
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAMAIGLLLWLSGTMTLNQVSGAFQRGAAELLPAALIVGFAKGLVILLGGDNPSAPSVLN
HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
TLLYSAGGSIGHLPDWLSAQMMLVFQSVFNVFVSSGSGQAALTMPLMSPLAELAGLSRQL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHH
AVLCFQLGDGLTNLIIPTSASLMGCLGVVKISFGQWLKLIWRLQVLLMTLASAAVGIAVY
HHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
TGYS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769 [H]