The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yfjG [H]

Identifier: 119775521

GI number: 119775521

Start: 2867055

End: 2867489

Strand: Reverse

Name: yfjG [H]

Synonym: Sama_2387

Alternate gene names: 119775521

Gene position: 2867489-2867055 (Counterclockwise)

Preceding gene: 119775523

Following gene: 119775520

Centisome position: 66.59

GC content: 51.03

Gene sequence:

>435_bases
ATGCCTAAGGTTACCCGAAGCGCACTGGTCAGATTCAGTGCCCGGCAGATGTACGATCTGGTTAATGATGTTGAGTCTTA
CAAGGAGTTTTTACCCGGCTGCGTTGGCGGCAAGGTAATTTCATTTGACGGACAAACCATGGTGGCCTCTGTGGATGTGG
CCAAGGCAGGCATCGCCAAAACCTTTACCACCCGAAACCAGGTGATCCCGGCCAGGCAAATATCCCTGAAGCTGGAGAAC
GGCCCGTTTCGGCATCTGATTGGCGAGTGGCGGTTCACCGAGCTTGCCGAAGATGCATGCAAGGTGGATTTTGAGCTGGA
TTTTGAATTTTCCAGTGGCCTTGCGGATTTTGCATTTGGCAAGGTATTCAAAGAATTGGCATCTTCTATGGTGACGGCCT
TTACCAACAGGGCCAAGGTAATATATGGCCAGTGA

Upstream 100 bases:

>100_bases
TTTATTGGTGAGTTTTTAGTCGTTTTAGCGGTTGCAGCGTTTTAGGCAAGCCGTGTTACAATCGGCGGCTATCCAATTTC
AAGAGTTTGAATACACGCGA

Downstream 100 bases:

>100_bases
TATCGAAAAATTCGGGGTAGATGTGGTGTATGCCTTACCCCACAAGCAAAAAGTGATTCATGTGATGGTGTCACCGGGCA
CCACCTTTATTGAGGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPKVTRSALVRFSARQMYDLVNDVESYKEFLPGCVGGKVISFDGQTMVASVDVAKAGIAKTFTTRNQVIPARQISLKLEN
GPFRHLIGEWRFTELAEDACKVDFELDFEFSSGLADFAFGKVFKELASSMVTAFTNRAKVIYGQ

Sequences:

>Translated_144_residues
MPKVTRSALVRFSARQMYDLVNDVESYKEFLPGCVGGKVISFDGQTMVASVDVAKAGIAKTFTTRNQVIPARQISLKLEN
GPFRHLIGEWRFTELAEDACKVDFELDFEFSSGLADFAFGKVFKELASSMVTAFTNRAKVIYGQ
>Mature_143_residues
PKVTRSALVRFSARQMYDLVNDVESYKEFLPGCVGGKVISFDGQTMVASVDVAKAGIAKTFTTRNQVIPARQISLKLENG
PFRHLIGEWRFTELAEDACKVDFELDFEFSSGLADFAFGKVFKELASSMVTAFTNRAKVIYGQ

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Homo sapiens, GI13376737, Length=136, Percent_Identity=30.1470588235294, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI151101384, Length=136, Percent_Identity=28.6764705882353, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI151101386, Length=136, Percent_Identity=28.6764705882353, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788972, Length=142, Percent_Identity=56.3380281690141, Blast_Score=182, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 16019; Mature: 15887

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVTRSALVRFSARQMYDLVNDVESYKEFLPGCVGGKVISFDGQTMVASVDVAKAGIAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHHH
TFTTRNQVIPARQISLKLENGPFRHLIGEWRFTELAEDACKVDFELDFEFSSGLADFAFG
HHCCCCCCCCCHHEEEEECCCCHHHHHHCCHHHHHHHHHHEECEEEEECCCCCCHHHHHH
KVFKELASSMVTAFTNRAKVIYGQ
HHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
PKVTRSALVRFSARQMYDLVNDVESYKEFLPGCVGGKVISFDGQTMVASVDVAKAGIAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHHH
TFTTRNQVIPARQISLKLENGPFRHLIGEWRFTELAEDACKVDFELDFEFSSGLADFAFG
HHCCCCCCCCCHHEEEEECCCCHHHHHHCCHHHHHHHHHHEECEEEEECCCCCCHHHHHH
KVFKELASSMVTAFTNRAKVIYGQ
HHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7524073; 9205837; 9278503 [H]