| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yeeI [C]
Identifier: 119775511
GI number: 119775511
Start: 2855374
End: 2856198
Strand: Direct
Name: yeeI [C]
Synonym: Sama_2377
Alternate gene names: 119775511
Gene position: 2855374-2856198 (Clockwise)
Preceding gene: 119775510
Following gene: 119775512
Centisome position: 66.31
GC content: 56.24
Gene sequence:
>825_bases ATGGCGGCACTCATCATCGTCAGTTTTCTGGGGATACTCGGTATTTATTGGATAGCCTCGGGCCCTTCCCGTCGCCACAA ACGACACCAGACCCTTGCCCAAGGCGTATTTCCAGCCAGCTGGCGCGCCATACTCAAGAAACAGGTAGCCCACTACCCTT TACTGCCGGATCACCTGCAACAGGAGCTAAGGCGAAAAATCCTGATTTTTCTCGGTGAGAAGCAATTTATTGGCTGCAAT GGGTTTCAAATTACCGACGAAGTCAGGGTGACCATTGCCGCTCAGGCATGCCTGCTACTGCTTAACCGTGACAGCGATTT CTATCCGGGCCTCAGGCAAATTCTGGTGTATCCCAACGCCTTCTATGTCAATCGCAGCGAGCGGGACGCCGCCGGCGTGG TGTGGGAGCGCCATGCGTTGCTTTCCGGTGAGTCCTGGAGCCAGGGGCAGGTGTTGCTTTCATGGCACGACATCATTGAA GACTGCCAGCACCCCTTCGATGGGTTTAACGTCATCATCCACGAGTTTGCACACCAACTGGATCAGGAAGATGGTCATGC CGACGGCGCGCCGCCGCTGCCCAGCAGTGAACGTTACCAAAGCTGGTCGAGCATCATGCAGCGGGAATACGACCTCCTGT GCCGGAAGGCAGACGCGGGTCTGCCAAGCCTGTTCGATTATTACGGCGCCACCGCACCTGCCGAGTTCTTTGCCGTCGTC AGCGAAACTTTTTTCACCCGTCCCGGTCCCTTTGCAGCCCACCACCCAGAGCTCTATGCAGAATTTACGCGTTTTTACCG GTTGGATCCTGCCCAGTGGCGATGA
Upstream 100 bases:
>100_bases CATGGTTGTCAGTACAAGCTACGAGCCCAAACCGGGCGATCCCTTGATTTAATTGTTGCTAAACCCCATTGAGATAAAAA GGAAGTCAACTGGGAGTCAC
Downstream 100 bases:
>100_bases TATGGTGGCAAAAACACCATAAAAACGAGATGAATCAATGATAAGAAAAGCGTTGGTACTGGCGGCTCTGCTTGTCAGCA GCCAGAGTATGGCAGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAALIIVSFLGILGIYWIASGPSRRHKRHQTLAQGVFPASWRAILKKQVAHYPLLPDHLQQELRRKILIFLGEKQFIGCN GFQITDEVRVTIAAQACLLLLNRDSDFYPGLRQILVYPNAFYVNRSERDAAGVVWERHALLSGESWSQGQVLLSWHDIIE DCQHPFDGFNVIIHEFAHQLDQEDGHADGAPPLPSSERYQSWSSIMQREYDLLCRKADAGLPSLFDYYGATAPAEFFAVV SETFFTRPGPFAAHHPELYAEFTRFYRLDPAQWR
Sequences:
>Translated_274_residues MAALIIVSFLGILGIYWIASGPSRRHKRHQTLAQGVFPASWRAILKKQVAHYPLLPDHLQQELRRKILIFLGEKQFIGCN GFQITDEVRVTIAAQACLLLLNRDSDFYPGLRQILVYPNAFYVNRSERDAAGVVWERHALLSGESWSQGQVLLSWHDIIE DCQHPFDGFNVIIHEFAHQLDQEDGHADGAPPLPSSERYQSWSSIMQREYDLLCRKADAGLPSLFDYYGATAPAEFFAVV SETFFTRPGPFAAHHPELYAEFTRFYRLDPAQWR >Mature_273_residues AALIIVSFLGILGIYWIASGPSRRHKRHQTLAQGVFPASWRAILKKQVAHYPLLPDHLQQELRRKILIFLGEKQFIGCNG FQITDEVRVTIAAQACLLLLNRDSDFYPGLRQILVYPNAFYVNRSERDAAGVVWERHALLSGESWSQGQVLLSWHDIIED CQHPFDGFNVIIHEFAHQLDQEDGHADGAPPLPSSERYQSWSSIMQREYDLLCRKADAGLPSLFDYYGATAPAEFFAVVS ETFFTRPGPFAAHHPELYAEFTRFYRLDPAQWR
Specific function: Unknown
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=233, Percent_Identity=35.6223175965665, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31360; Mature: 31229
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALIIVSFLGILGIYWIASGPSRRHKRHQTLAQGVFPASWRAILKKQVAHYPLLPDHLQ CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH QELRRKILIFLGEKQFIGCNGFQITDEVRVTIAAQACLLLLNRDSDFYPGLRQILVYPNA HHHHHHHEEEECCCCEECCCCCEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCE FYVNRSERDAAGVVWERHALLSGESWSQGQVLLSWHDIIEDCQHPFDGFNVIIHEFAHQL EEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHH DQEDGHADGAPPLPSSERYQSWSSIMQREYDLLCRKADAGLPSLFDYYGATAPAEFFAVV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH SETFFTRPGPFAAHHPELYAEFTRFYRLDPAQWR HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AALIIVSFLGILGIYWIASGPSRRHKRHQTLAQGVFPASWRAILKKQVAHYPLLPDHLQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH QELRRKILIFLGEKQFIGCNGFQITDEVRVTIAAQACLLLLNRDSDFYPGLRQILVYPNA HHHHHHHEEEECCCCEECCCCCEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCE FYVNRSERDAAGVVWERHALLSGESWSQGQVLLSWHDIIEDCQHPFDGFNVIIHEFAHQL EEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHH DQEDGHADGAPPLPSSERYQSWSSIMQREYDLLCRKADAGLPSLFDYYGATAPAEFFAVV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH SETFFTRPGPFAAHHPELYAEFTRFYRLDPAQWR HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]