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The map label for this gene is yfjD [C]

Identifier: 119775503

GI number: 119775503

Start: 2846327

End: 2847397

Strand: Direct

Name: yfjD [C]

Synonym: Sama_2369

Alternate gene names: 119775503

Gene position: 2846327-2847397 (Clockwise)

Preceding gene: 119775494

Following gene: 119775504

Centisome position: 66.1

GC content: 53.03

Gene sequence:

>1071_bases
ATGGTTACCCTCATTATTATCATACTCGTTGCCGTGGGCGTTTCCTTTCTGTGCAGCGTGTTCGAAGCCGTGCTTCTGTC
TGTGACTCCCAGTTATATCGCCTCACTGGACGAAAATAATCCTGCCGCAGCCAGCCGCCTGCGCGCTCAAAAAGACAATG
TTGAAGCACCGCTGGTTGCCATCCTGACGCTAAATACCATTTCCCATACCGTAGGTGCGGCCGTGGCTGGTGCTCAGGCC
GCCCATGTATTTGGTGACCACATGCTCGGAGTATTTTCGGCAGTGCTTACCTTTATTATTCTGTTCTTCTCCGAGATCAT
CCCCAAAACCCTGGGTGCCAACTACTGGCGCACCCTGGCACCGTCAGTCAGCCTCGCACTGCTGTGGATGGAACGCGCCA
CCAAGCCGCTTATCTGGATGTCGCAGCAGGTCACCAAACTCTTGGGTAAGGGCGAAGAAGGCCAATACATTCGCCAGGAA
ATGAGTGCCATGGCGCGCATGGGACACGAGTCCGGTGAATTGGATGCCCAGGAATCCCGCATTCTGACGCAAATTCTGTC
GGTAAAAGAAATGCCGGTCACCAGCATCATGACACCCAGAACCGTGATGTTCTCCGTGCCCATGTCCATGACATTGGAAG
ACTTTGCCGGCAAGCATATGGCCAAGCCCTTCAGTCGTCTGCCGGTATTTGGCGAAGATAACGATGACATTCAGGGTTTT
GTAAACCGTACAGATATTTTGCTCGGGGTACGTGATAATCCCCAAAACACCATGGCCAGCCTCAAGCGCAATCTGCTGGC
GGTGCCCGAAACGGCCAAAATTCTGCCATTGCTTGAGCTGATGATTAAGCGCAATACCCAGATTGCTGTGGTGGTGGATG
AATATGGCTCGGCGCAGGGCCTGGTAACCCAGGAAGACATTATCGAGTCCATGCTCGGACTGGAGATTGTTGACCTGAAC
GACCCGGCCATCGATATGCAGCGTCTTGCAAGGCAATTATGGAAGAGACGCATCAAGGAGAAAGGCATTCGACTGTCAGA
TGACCAGGACGGAGACCTTCACTCATTCTGA

Upstream 100 bases:

>100_bases
TACCGATCCATCACGAAATTCGCCAGCAGCCAAACCAAGTCTATGCTACCATGGCCGCCGGTCGATTTTGGCCTATGCTA
TGGAGCTATTTTAGCCTTTT

Downstream 100 bases:

>100_bases
TTTCTGCCCGGCTCTTGCCGGGCATTGTTAATAAGGCGTTTTGTGCAGACTTCAGCTTATTACCTGCAACTGGCACACAT
CAACGATTGCCACAGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MVTLIIIILVAVGVSFLCSVFEAVLLSVTPSYIASLDENNPAAASRLRAQKDNVEAPLVAILTLNTISHTVGAAVAGAQA
AHVFGDHMLGVFSAVLTFIILFFSEIIPKTLGANYWRTLAPSVSLALLWMERATKPLIWMSQQVTKLLGKGEEGQYIRQE
MSAMARMGHESGELDAQESRILTQILSVKEMPVTSIMTPRTVMFSVPMSMTLEDFAGKHMAKPFSRLPVFGEDNDDIQGF
VNRTDILLGVRDNPQNTMASLKRNLLAVPETAKILPLLELMIKRNTQIAVVVDEYGSAQGLVTQEDIIESMLGLEIVDLN
DPAIDMQRLARQLWKRRIKEKGIRLSDDQDGDLHSF

Sequences:

>Translated_356_residues
MVTLIIIILVAVGVSFLCSVFEAVLLSVTPSYIASLDENNPAAASRLRAQKDNVEAPLVAILTLNTISHTVGAAVAGAQA
AHVFGDHMLGVFSAVLTFIILFFSEIIPKTLGANYWRTLAPSVSLALLWMERATKPLIWMSQQVTKLLGKGEEGQYIRQE
MSAMARMGHESGELDAQESRILTQILSVKEMPVTSIMTPRTVMFSVPMSMTLEDFAGKHMAKPFSRLPVFGEDNDDIQGF
VNRTDILLGVRDNPQNTMASLKRNLLAVPETAKILPLLELMIKRNTQIAVVVDEYGSAQGLVTQEDIIESMLGLEIVDLN
DPAIDMQRLARQLWKRRIKEKGIRLSDDQDGDLHSF
>Mature_356_residues
MVTLIIIILVAVGVSFLCSVFEAVLLSVTPSYIASLDENNPAAASRLRAQKDNVEAPLVAILTLNTISHTVGAAVAGAQA
AHVFGDHMLGVFSAVLTFIILFFSEIIPKTLGANYWRTLAPSVSLALLWMERATKPLIWMSQQVTKLLGKGEEGQYIRQE
MSAMARMGHESGELDAQESRILTQILSVKEMPVTSIMTPRTVMFSVPMSMTLEDFAGKHMAKPFSRLPVFGEDNDDIQGF
VNRTDILLGVRDNPQNTMASLKRNLLAVPETAKILPLLELMIKRNTQIAVVVDEYGSAQGLVTQEDIIESMLGLEIVDLN
DPAIDMQRLARQLWKRRIKEKGIRLSDDQDGDLHSF

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=251, Percent_Identity=25.0996015936255, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI145693175, Length=265, Percent_Identity=23.7735849056604, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790664, Length=352, Percent_Identity=24.4318181818182, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786879, Length=157, Percent_Identity=29.2993630573248, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082033, Length=175, Percent_Identity=30.8571428571429, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6324512, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 39276; Mature: 39276

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLIIIILVAVGVSFLCSVFEAVLLSVTPSYIASLDENNPAAASRLRAQKDNVEAPLVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEH
ILTLNTISHTVGAAVAGAQAAHVFGDHMLGVFSAVLTFIILFFSEIIPKTLGANYWRTLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PSVSLALLWMERATKPLIWMSQQVTKLLGKGEEGQYIRQEMSAMARMGHESGELDAQESR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ILTQILSVKEMPVTSIMTPRTVMFSVPMSMTLEDFAGKHMAKPFSRLPVFGEDNDDIQGF
HHHHHHHHHCCCHHHHCCCCCEEEECCHHHHHHHHCCHHHCCHHHHCCCCCCCCCHHHHH
VNRTDILLGVRDNPQNTMASLKRNLLAVPETAKILPLLELMIKRNTQIAVVVDEYGSAQG
HCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
LVTQEDIIESMLGLEIVDLNDPAIDMQRLARQLWKRRIKEKGIRLSDDQDGDLHSF
CCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTLIIIILVAVGVSFLCSVFEAVLLSVTPSYIASLDENNPAAASRLRAQKDNVEAPLVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEH
ILTLNTISHTVGAAVAGAQAAHVFGDHMLGVFSAVLTFIILFFSEIIPKTLGANYWRTLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PSVSLALLWMERATKPLIWMSQQVTKLLGKGEEGQYIRQEMSAMARMGHESGELDAQESR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ILTQILSVKEMPVTSIMTPRTVMFSVPMSMTLEDFAGKHMAKPFSRLPVFGEDNDDIQGF
HHHHHHHHHCCCHHHHCCCCCEEEECCHHHHHHHHCCHHHCCHHHHCCCCCCCCCHHHHH
VNRTDILLGVRDNPQNTMASLKRNLLAVPETAKILPLLELMIKRNTQIAVVVDEYGSAQG
HCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
LVTQEDIIESMLGLEIVDLNDPAIDMQRLARQLWKRRIKEKGIRLSDDQDGDLHSF
CCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]