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The map label for this gene is yfgL [H]

Identifier: 119775496

GI number: 119775496

Start: 2838800

End: 2839987

Strand: Reverse

Name: yfgL [H]

Synonym: Sama_2362

Alternate gene names: 119775496

Gene position: 2839987-2838800 (Counterclockwise)

Preceding gene: 119775497

Following gene: 119775495

Centisome position: 65.95

GC content: 55.64

Gene sequence:

>1188_bases
ATGAAGTCTTGGTGCAAGAATTTGCTGGCTGCTGGCCTGAGTTTGGCCGTGCTGTCAGCCTGCTCCTCCAATGACGTGGA
AGAAGACCCCGTCAGCGAACTCAAGGAGCTTAACGCGACCGTTTTCCCGGAAATCAACTGGAGCGCCAGTGTGGGTAGCG
GTGTAGGCGATTATTACTCACGTCTGCGACCTGCAGTGGAATACGGCAAGATATTTGCCGCCGACCGTGACGGTTTGGTC
GTTGCGTTCGATGAAACCAGTGGTGAAAAGCTGTGGGAAGTCGATTTCAGTGATTTGTTCAAAGACAGATTGCTGGGCAA
AAACAAAGGCGCCCGTCTTGCTTCTGGCATGACAGCGGCTCGCGGCAAGGTGTTTGTGGGTGGTGAGAGTGGTCTGTTGG
CTGCTCTGGATGCCGAAACCGGCGCCGTGGTATGGAGCGTTCAGGCATCGGGCGAATTGCTGTCTGCACCGACCGTGGGT
GAAAACACCGTGGTGGTAAACGCCAGCTCAGGTTCATTGGATGCCTTTGACGTAGATACCGGCGAAAAACGTTGGAGCTA
CGAAAACGCACTGCCCAACCTGACCCTGCGTGGTACCGGTGCCGCAGCCTTTATGGCCGGTGGTTTCTTTGTGGGTACCG
CCGATGGCAAGGTTGCCGTGGTGGTGAAAGATAATGGTCAACCTGCGTGGGAGCAGCCCATTTACACCCCCAAGGGTGGT
AATGAGTTCAGCCGTATGGCCGACGTTGACATGACGCCACTGCCTGTGGGTGACAACCTGTACGCTGTGAGCTACAACGG
TAATCTGGTCTCCATGGAAATGCGCTCCGGTCGTGTTCTCTGGACCCGTAAGTATTCCAGCTTCAACGAGCTGGCCGCCA
GCGGTGTGCAGTTGTATCTGGTTGCAGACAGTAGCCGTATTTATGCACTTGACCGTCGCAACGGTCTGGAGCTGTGGAGC
AATTCCGAGCTGGCCAACCGTGAACTGACTTCACCCGTGGTGTTTGATAACTACCTGGTAGTGGGTGATTTCGAAGGTTA
TCTGCACTTTATCGACCGTAACGATGGCAGCATCGTCGGCCGCATCGAAGTCGACAGCGACGGCCTTTACAGCCAGCCGC
TGGTCGTCGATGGTAAGATATACGTGCAGGGCCGCAGCGGCAAAGTGGCCCGCATCGCACTTCCTTAA

Upstream 100 bases:

>100_bases
AGGCTGCCTATCAGGCTGCGCTGGACAAGGGCGGCATCTCTGCCAGCCCACTTCTTAAAATGAAGCTGGATAACCTGAAT
CAGGCATAAGGAAGTCGCCG

Downstream 100 bases:

>100_bases
GTCAAGGTTTAACCTTGCCAAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAAAGATTGTTATAGAGGCAAAAGC
ATGATCCCTGTAGTGGCCCT

Product: outer membrane protein assembly complex subunit YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKSWCKNLLAAGLSLAVLSACSSNDVEEDPVSELKELNATVFPEINWSASVGSGVGDYYSRLRPAVEYGKIFAADRDGLV
VAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGMTAARGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVG
ENTVVVNASSGSLDAFDVDTGEKRWSYENALPNLTLRGTGAAAFMAGGFFVGTADGKVAVVVKDNGQPAWEQPIYTPKGG
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYLVADSSRIYALDRRNGLELWS
NSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVGRIEVDSDGLYSQPLVVDGKIYVQGRSGKVARIALP

Sequences:

>Translated_395_residues
MKSWCKNLLAAGLSLAVLSACSSNDVEEDPVSELKELNATVFPEINWSASVGSGVGDYYSRLRPAVEYGKIFAADRDGLV
VAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGMTAARGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVG
ENTVVVNASSGSLDAFDVDTGEKRWSYENALPNLTLRGTGAAAFMAGGFFVGTADGKVAVVVKDNGQPAWEQPIYTPKGG
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYLVADSSRIYALDRRNGLELWS
NSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVGRIEVDSDGLYSQPLVVDGKIYVQGRSGKVARIALP
>Mature_395_residues
MKSWCKNLLAAGLSLAVLSACSSNDVEEDPVSELKELNATVFPEINWSASVGSGVGDYYSRLRPAVEYGKIFAADRDGLV
VAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGMTAARGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVG
ENTVVVNASSGSLDAFDVDTGEKRWSYENALPNLTLRGTGAAAFMAGGFFVGTADGKVAVVVKDNGQPAWEQPIYTPKGG
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYLVADSSRIYALDRRNGLELWS
NSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVGRIEVDSDGLYSQPLVVDGKIYVQGRSGKVARIALP

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=381, Percent_Identity=38.8451443569554, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 42413; Mature: 42413

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWCKNLLAAGLSLAVLSACSSNDVEEDPVSELKELNATVFPEINWSASVGSGVGDYYS
CCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHH
RLRPAVEYGKIFAADRDGLVVAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGMTAA
HHHHHHHHCEEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCHHCCCCHH
RGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVGENTVVVNASSGSLDAFDVDT
CCEEEECCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEECCC
GEKRWSYENALPNLTLRGTGAAAFMAGGFFVGTADGKVAVVVKDNGQPAWEQPIYTPKGG
CCCCCCHHHCCCCEEEECCCCEEEEECCEEEEECCCEEEEEEECCCCCCCCCCEECCCCC
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYL
CHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEECCCHHHHHHCCEEEEE
VADSSRIYALDRRNGLELWSNSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVG
EECCCEEEEEECCCCCEEECCCCCCCCCCCCCEEECCEEEEECCCEEEEEEECCCCCEEE
RIEVDSDGLYSQPLVVDGKIYVQGRSGKVARIALP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MKSWCKNLLAAGLSLAVLSACSSNDVEEDPVSELKELNATVFPEINWSASVGSGVGDYYS
CCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHH
RLRPAVEYGKIFAADRDGLVVAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGMTAA
HHHHHHHHCEEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCHHCCCCHH
RGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVGENTVVVNASSGSLDAFDVDT
CCEEEECCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCCCEEEEECCCCCEEEEECCC
GEKRWSYENALPNLTLRGTGAAAFMAGGFFVGTADGKVAVVVKDNGQPAWEQPIYTPKGG
CCCCCCHHHCCCCEEEECCCCEEEEECCEEEEECCCEEEEEEECCCCCCCCCCEECCCCC
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYL
CHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEECCCHHHHHHCCEEEEE
VADSSRIYALDRRNGLELWSNSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVG
EECCCEEEEEECCCCCEEECCCCCCCCCCCCCEEECCEEEEECCCEEEEEEECCCCCEEE
RIEVDSDGLYSQPLVVDGKIYVQGRSGKVARIALP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]