| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is engA
Identifier: 119775495
GI number: 119775495
Start: 2837253
End: 2838719
Strand: Reverse
Name: engA
Synonym: Sama_2361
Alternate gene names: 119775495
Gene position: 2838719-2837253 (Counterclockwise)
Preceding gene: 119775496
Following gene: 119775493
Centisome position: 65.92
GC content: 56.85
Gene sequence:
>1467_bases ATGATCCCTGTAGTGGCCCTGGTGGGTCGCCCCAACGTGGGCAAATCGACCCTGTTTAACCGACTCACGAGAACCCGGGA TGCCTTGGTGGCGGATTATCCGGGGCTGACCCGTGACCGCAAATACGGCCGGGCTCATCTGTCTGGCTATGAATTTATCG TGGTGGATACCGGCGGTATCGACGGCACCGAAGAAGGCATCGAGACCAAGATGGCCGAGCAGTCATTGGCGGCCATCGAA GAAGCCGATGTGGTGCTGTTTATGACCGACGCCCGCGCCGGTCTGACTGCCGCTGACCTGGCCATTGCCCAGCACCTGCG CAGCCGCGATAAAATCACTTTCGTAGTGGCCAACAAGGTGGATGGCATCGATGCCGACTCTGCCTGTGGCGAATTTTGGC AGCTGGGTCTGGGCGAGGTGTACCAGATGGCCGCCGCACAGGGCCGTGGTGTAACTGGCTTGGTGGAATATGCTCTGGCG CCTTTTGCCGAAGCCATGGGACTGGTCCGTGACGACGACGGCGAAGTGGTGACAGATGAGCGCAACTACACCGAAGAAGA AGCCGAAGCCGAACAGCAACGTCTGGCGGAGCAGCCCATTAAGTTGGCCATTATCGGTAAGCCCAATGTGGGCAAGTCCA CCCTGACCAACCGTATTTTGGGTGAAGAGCGGGTTGTGGTATACGACCAGCCCGGCACGACCCGTGACTCGGTATACATC CCCATGGAGCGTGACGGCCGTAACTATGTGCTTATCGATACTGCCGGTGTGCGTCGTCGTGCCCGCGTGCATGAAGTGAT TGAAAAGTTCTCTGTTATCAAGACACTCAAGGCCGTGGAAGACTCCAACGTCGTGCTGCTGGTTATCGATGCCCATGAAG GCATTGCCGAGCAGGATCTGGGACTCCTGGGCTTTGTGCTCAACTCAGGCCGCGCTCTGGTACTTGCAGTCAACAAGTGG GATGGTTTGGATCAAGACGTCAAAGACAGGGTGAAAACCGAGCTCGACCGTCGTCTGGGCTTTATCGACTTTGCCCGTAT CCACTTTATTTCTGCGCTCCATGGTACAGGCGTTGGTCACTTGTTTGAGTCTATCGAAGAGGCCTACGACAGTGCGACCC GCCGTGTGAGCACTTCCATGCTGACCCGTATCATGCAGATGGCGCAGGACGATCACCAACCGCCGATGGTGAATGGTCGC CGCGTGAAGCTCAAATACGCCCACGTGGGAGGCTACAATCCGCCTATCGTGGTAGTACACGGCAACCAGGTAAGCCGACT GCCGGATTCTTACAAGCGTTACATGATGAACTACTATCGTCGCGCGCTTAAGGTTGTGGGTACCCCAATCCAGCTGCGCT TCCATGAGGGTGATAACCCGTTCGAAGGCCGTAAGGAAAAACTGACTCTGAGCCAGGAGCGTCGCCGTAAGCGGATGATG AGCCATATCAAGAGCAAGAAAGCCTGA
Upstream 100 bases:
>100_bases CCCGCATCGCACTTCCTTAAGTCAAGGTTTAACCTTGCCAAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAAAG ATTGTTATAGAGGCAAAAGC
Downstream 100 bases:
>100_bases TGTTGCCTGTTGGCAACCAGTCGGACTGAAGCGTCAATAAAAAAGCCGGGCATATGCCTGGCTTTTTTATGCTCTTCGCG GGCATGAAAATCTTTACTCC
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKVDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALA PFAEAMGLVRDDDGEVVTDERNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYI PMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVLNSGRALVLAVNKW DGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGR RVKLKYAHVGGYNPPIVVVHGNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQERRRKRMM SHIKSKKA
Sequences:
>Translated_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKVDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALA PFAEAMGLVRDDDGEVVTDERNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYI PMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVLNSGRALVLAVNKW DGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGR RVKLKYAHVGGYNPPIVVVHGNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQERRRKRMM SHIKSKKA >Mature_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKVDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALA PFAEAMGLVRDDDGEVVTDERNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYI PMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVLNSGRALVLAVNKW DGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGR RVKLKYAHVGGYNPPIVVVHGNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQERRRKRMM SHIKSKKA
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=493, Percent_Identity=69.9797160243408, Blast_Score=707, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=103, Percent_Identity=35.9223300970874, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=189, Percent_Identity=27.5132275132275, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_SHEAM (A1S859)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928235.1 - ProteinModelPortal: A1S859 - SMR: A1S859 - STRING: A1S859 - GeneID: 4604610 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2361 - NMPDR: fig|326297.7.peg.2211 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: A1S859 - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 54438; Mature: 54438
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKV CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCC DGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTDE CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEECCCCCEEECC RNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYI CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEE PMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDL EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC GLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGH HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEEE GNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQERRRKRMM CCCHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHH SHIKSKKA HHHHHCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKV CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCC DGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTDE CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEECCCCCEEECC RNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYI CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEE PMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDL EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC GLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGH HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEEE GNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQERRRKRMM CCCHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHH SHIKSKKA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA