Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775468

Identifier: 119775468

GI number: 119775468

Start: 2799182

End: 2800171

Strand: Direct

Name: 119775468

Synonym: Sama_2333

Alternate gene names: NA

Gene position: 2799182-2800171 (Clockwise)

Preceding gene: 119775467

Following gene: 119775469

Centisome position: 65.0

GC content: 38.79

Gene sequence:

>990_bases
ATGACCTCACTATTGGCTGATAAACTCCCGATTGGTGGTGAGCAAGAAATAGCTTTTGATGGCCTATATTATGGGACTAC
AAACAGTGGACGCTCGTCGCTTCGTTGGGCATTGCACTCTATGGATCTATACGCCAAGCGAATACTGGTTCCTGATTTTG
TGTGCCAAGTGGTTATTGATGTTTTGCTGGAGTTCTCTATACAACCTGTGTTTTATGAGGTCGGGCTGGATTTAGACTTC
AAGTTACCTACAGATGCAAAAAATTGTGACGCGCTATATTTAGTTAAATACTTTGGCCACAGTTCAAAATCTTTTAGCAT
AGCGCTAGAGCAGTCGAATATTCCATTGATAATTGACACAGTGTTCGATGCTGAACTACCAACTGTAAAAACAAATAGCC
ACTGGTGTGCATTTAACAGCCTAAGAAAAATATCCAGGATTGCTGACTACAGCCAACTAGCCTCAAACAAACCACTTATT
CCAATCGAACGCACCAGATTGGAAACTTTTTCCAGGTTGAAGTATCAAGCTAAAAATATAAAACATCAGTTTTTAACTAA
AAAAATTGAAAGCGAAGAACGTTACTTGAATCTATTTTCAGATGCTGAATCCATCCTTGATGATAGCAAGGGAGTCTATT
ATCCGGAAGATAATAGTATATTTTTATCAAACATTTTTCACCACAACCTTTCAGCTGAAACAGAGCTAAGACGTTCTAAT
TTGGAGATAGCAAAAGCAACCCTTAGCGATGTCACATATATAGACATCAACCCTTGCTTACCGAGTTTCCTGCCAATACT
TTTAAAAGATAGAGATAGGGTTAGAGAAAAACTAAAGAAAAACCATATGTACCTAGCTATTCATTGGCCATCGCTATCTA
CTCTGGGCAATAAGCTATCACCTAACATACTCTCTATACCATTAGACTCCAGATATCAGATGTCTGATATACAGCGGATG
TGCCAAATTATAGCCAAGGAGGCACTGTGA

Upstream 100 bases:

>100_bases
AAAGAAACTGTAAACCCATATGGAAAGGGTGATAGCGTCCAAAAAGTGATTGCTGTGTTGAAATCTGTTGACTTAGATAG
CTTAAAGAGAAAGCCATTTT

Downstream 100 bases:

>100_bases
ACATTCGACTAAAACAGGCAGAGATAAAAGATTTTGATGGTTTCTTAGCGATACGTTCGGAAGCAAAAAATGTTTATTGG
TCTGGTTTTAGCGCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTSLLADKLPIGGEQEIAFDGLYYGTTNSGRSSLRWALHSMDLYAKRILVPDFVCQVVIDVLLEFSIQPVFYEVGLDLDF
KLPTDAKNCDALYLVKYFGHSSKSFSIALEQSNIPLIIDTVFDAELPTVKTNSHWCAFNSLRKISRIADYSQLASNKPLI
PIERTRLETFSRLKYQAKNIKHQFLTKKIESEERYLNLFSDAESILDDSKGVYYPEDNSIFLSNIFHHNLSAETELRRSN
LEIAKATLSDVTYIDINPCLPSFLPILLKDRDRVREKLKKNHMYLAIHWPSLSTLGNKLSPNILSIPLDSRYQMSDIQRM
CQIIAKEAL

Sequences:

>Translated_329_residues
MTSLLADKLPIGGEQEIAFDGLYYGTTNSGRSSLRWALHSMDLYAKRILVPDFVCQVVIDVLLEFSIQPVFYEVGLDLDF
KLPTDAKNCDALYLVKYFGHSSKSFSIALEQSNIPLIIDTVFDAELPTVKTNSHWCAFNSLRKISRIADYSQLASNKPLI
PIERTRLETFSRLKYQAKNIKHQFLTKKIESEERYLNLFSDAESILDDSKGVYYPEDNSIFLSNIFHHNLSAETELRRSN
LEIAKATLSDVTYIDINPCLPSFLPILLKDRDRVREKLKKNHMYLAIHWPSLSTLGNKLSPNILSIPLDSRYQMSDIQRM
CQIIAKEAL
>Mature_328_residues
TSLLADKLPIGGEQEIAFDGLYYGTTNSGRSSLRWALHSMDLYAKRILVPDFVCQVVIDVLLEFSIQPVFYEVGLDLDFK
LPTDAKNCDALYLVKYFGHSSKSFSIALEQSNIPLIIDTVFDAELPTVKTNSHWCAFNSLRKISRIADYSQLASNKPLIP
IERTRLETFSRLKYQAKNIKHQFLTKKIESEERYLNLFSDAESILDDSKGVYYPEDNSIFLSNIFHHNLSAETELRRSNL
EIAKATLSDVTYIDINPCLPSFLPILLKDRDRVREKLKKNHMYLAIHWPSLSTLGNKLSPNILSIPLDSRYQMSDIQRMC
QIIAKEAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37666; Mature: 37535

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLLADKLPIGGEQEIAFDGLYYGTTNSGRSSLRWALHSMDLYAKRILVPDFVCQVVID
CCCCCCCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLEFSIQPVFYEVGLDLDFKLPTDAKNCDALYLVKYFGHSSKSFSIALEQSNIPLIIDT
HHHHHCCCEEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEE
VFDAELPTVKTNSHWCAFNSLRKISRIADYSQLASNKPLIPIERTRLETFSRLKYQAKNI
EECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KHQFLTKKIESEERYLNLFSDAESILDDSKGVYYPEDNSIFLSNIFHHNLSAETELRRSN
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHCCCCCHHHHHHHC
LEIAKATLSDVTYIDINPCLPSFLPILLKDRDRVREKLKKNHMYLAIHWPSLSTLGNKLS
HHHHHHHHCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCC
PNILSIPLDSRYQMSDIQRMCQIIAKEAL
CCEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSLLADKLPIGGEQEIAFDGLYYGTTNSGRSSLRWALHSMDLYAKRILVPDFVCQVVID
CCCCCCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLEFSIQPVFYEVGLDLDFKLPTDAKNCDALYLVKYFGHSSKSFSIALEQSNIPLIIDT
HHHHHCCCEEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEE
VFDAELPTVKTNSHWCAFNSLRKISRIADYSQLASNKPLIPIERTRLETFSRLKYQAKNI
EECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KHQFLTKKIESEERYLNLFSDAESILDDSKGVYYPEDNSIFLSNIFHHNLSAETELRRSN
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHCCCCCHHHHHHHC
LEIAKATLSDVTYIDINPCLPSFLPILLKDRDRVREKLKKNHMYLAIHWPSLSTLGNKLS
HHHHHHHHCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCC
PNILSIPLDSRYQMSDIQRMCQIIAKEAL
CCEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA