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The map label for this gene is mcp4 [H]

Identifier: 119775462

GI number: 119775462

Start: 2791205

End: 2792869

Strand: Reverse

Name: mcp4 [H]

Synonym: Sama_2327

Alternate gene names: 119775462

Gene position: 2792869-2791205 (Counterclockwise)

Preceding gene: 119775475

Following gene: 119775460

Centisome position: 64.86

GC content: 51.71

Gene sequence:

>1665_bases
ATGTTGTCGAATATCGAGGTGCTTATGCTTGGCCACTATCTGAGAAATTACAATATTTCACGCCGAATTTGGGTGATGTT
GCTGTTGTCATTGGTCGCGACCCTGCTGATGTTTGTGTTTGCCCTGCGCAACATGGATACGGTGCTGGTGCAGGAAAAAG
AAGCGCGGCTGAATGCACTGACAGATATCGCTATCAGCATCATCACAGACTTTCAGGGCAAGGCCCAATCCGGGGAGCTT
AGCGAAGCCGATGCCAAGGCAAAGGCGTTGTCCGCCCTGGATAACCTCAGGTACTCGGGCAAAGAATACTACTTCACCAT
CGATAGACAGGGGATGATGATCCAGCATCCCTTTGCCAAAAAATTGGTTGATACCAATGTGTTGGGAATGGCTGATCCCA
ACGGGGTGAAGTTGTTCGCCGAAATGATCCGCCTCACGCAAAACAGTGATTCAGCTCTGGTCAATTACATGTGGAATCAG
CCAGACGCTGACGCCCCCAGTCCTAAAATGAGTGTGGTAAAGCGCTTTAGTGAGTGGGGCTGGATAGTGGGCACAGGTAT
TTATGTGGATGATATTGCGGCCCAGAAACAGGAGTTTACCTGGCAATATTTGCTGGTGTTCCTGTTGGTGTGGGGGCCTG
TGATGGCATTGTTGTTGATGATAAGTCGCAGTGTGACCGAGCCTTTGCAGCGAACCCTGATGGCTTTTAAAAACATTGCC
GAAGGTGAGGCCAACCTGACCTTGAGACTGGAGGAGCGCGGCCGCGATGAGCTATCACAGGTGTCGGTATACTTTAACGC
CTTTGTTGGTCGTATTCAGTCACTGGTGATCTCGGTGCGCGATTCGGTTGACCACAGCCGGCAGTTATCTTCCTCGCTTT
CGAATGTTGCCCACCAGGCGGCCCATGCCACAAACAGCATGCAACAGGAAACCCAGAGTGTGGCAGCTGCTATCAATCAA
ATGTCTGCCACGGCCAGTGAAGTGGCGGCGAATGCCCAGCTTGCGGCAAAATCGGCAAAAAATGCCGACAGCCAGGCTGA
CAGTACCAACCTGGTGGTAACCCATGCCATGGGCAATGTTCGGCAGCTATCGAGCGAGCTGGAAGAGACCTCAGAGATCG
CCAAGGCACTCAAAGTCAGCTCGGGTGAAATCGGGCAAATTCTCGATGTGATAGTGGGCATCGCCGAGCAGACGAATTTG
CTGGCACTCAATGCTGCCATTGAGGCCGCCCGTGCAGGTGAGGCGGGGCGCGGTTTTGCTGTGGTTGCGGATGAGGTCAG
AACCCTGGCGAGCCGTACTCAACAATCCACTCAGGAGATCAATGCCATCATTGAAGCCATTCGTGGCGCCGTCGACAAAG
TCAATGCATCGGTTGCCAGAGCACGTCAGCAATCGGATAATACGGTAGATGAAACGGCACAGGTGATGGATGCCCTCGGC
CTGATTAAACAGGCCATAGGTCAGATAAATGATATGAACCTGCAAATCGCAACCGCGACTGATGAACAGAGTGCCGTGAT
TGCGGAGCTGAATGAAAATATTAATAGAATCAATGAGATTTCAGTAGAAAACCTGTCCAAGAGTGAAACTGTTGGTCACA
CCAGTGACCGGATTGCAGAAGACTCCAGGCAGATGGCGCAGTTGATCGCGGTATTTAAGGTGTAA

Upstream 100 bases:

>100_bases
CTGACCCCGTCTTTACTCAAGGTTTGTCGGATTTTTGGGGGCTGCTCCCGGGAATGAGAGCATATCCAGCGGATAACGTT
CGCCCCAAAACCCTCTGGCA

Downstream 100 bases:

>100_bases
CGGCTCGAATTCACCGCTCGCCCGCCCCGTGCAGCCCAGTAGCCTTTCTGGCGCGAGGGAAGGAGCGAGCGGTGATTGAT
GATCGCCCCTTTTGGGGAGG

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLSNIEVLMLGHYLRNYNISRRIWVMLLLSLVATLLMFVFALRNMDTVLVQEKEARLNALTDIAISIITDFQGKAQSGEL
SEADAKAKALSALDNLRYSGKEYYFTIDRQGMMIQHPFAKKLVDTNVLGMADPNGVKLFAEMIRLTQNSDSALVNYMWNQ
PDADAPSPKMSVVKRFSEWGWIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA
EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQ
MSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNL
LALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG
LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV

Sequences:

>Translated_554_residues
MLSNIEVLMLGHYLRNYNISRRIWVMLLLSLVATLLMFVFALRNMDTVLVQEKEARLNALTDIAISIITDFQGKAQSGEL
SEADAKAKALSALDNLRYSGKEYYFTIDRQGMMIQHPFAKKLVDTNVLGMADPNGVKLFAEMIRLTQNSDSALVNYMWNQ
PDADAPSPKMSVVKRFSEWGWIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA
EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQ
MSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNL
LALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG
LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV
>Mature_554_residues
MLSNIEVLMLGHYLRNYNISRRIWVMLLLSLVATLLMFVFALRNMDTVLVQEKEARLNALTDIAISIITDFQGKAQSGEL
SEADAKAKALSALDNLRYSGKEYYFTIDRQGMMIQHPFAKKLVDTNVLGMADPNGVKLFAEMIRLTQNSDSALVNYMWNQ
PDADAPSPKMSVVKRFSEWGWIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA
EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQ
MSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNL
LALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG
LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=371, Percent_Identity=30.4582210242588, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI2367378, Length=368, Percent_Identity=29.6195652173913, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=32.5373134328358, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=31.6993464052288, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789453, Length=367, Percent_Identity=28.8828337874659, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 60595; Mature: 60595

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNIEVLMLGHYLRNYNISRRIWVMLLLSLVATLLMFVFALRNMDTVLVQEKEARLNAL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TDIAISIITDFQGKAQSGELSEADAKAKALSALDNLRYSGKEYYFTIDRQGMMIQHPFAK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECHHHH
KLVDTNVLGMADPNGVKLFAEMIRLTQNSDSALVNYMWNQPDADAPSPKMSVVKRFSEWG
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHCC
WIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA
CEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQA
CCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHH
RQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAE
HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
DSRQMAQLIAVFKV
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLSNIEVLMLGHYLRNYNISRRIWVMLLLSLVATLLMFVFALRNMDTVLVQEKEARLNAL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TDIAISIITDFQGKAQSGELSEADAKAKALSALDNLRYSGKEYYFTIDRQGMMIQHPFAK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECHHHH
KLVDTNVLGMADPNGVKLFAEMIRLTQNSDSALVNYMWNQPDADAPSPKMSVVKRFSEWG
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHCC
WIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA
CEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQA
CCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHH
RQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAE
HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
DSRQMAQLIAVFKV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]