Click here to switch to the map view.

The map label for this gene is 119775460

Identifier: 119775460

GI number: 119775460

Start: 2788363

End: 2788995

Strand: Reverse

Name: 119775460

Synonym: Sama_2325

Alternate gene names: NA

Gene position: 2788995-2788363 (Counterclockwise)

Preceding gene: 119775462

Following gene: 119775459

Centisome position: 64.77

GC content: 53.71

Gene sequence:

>633_bases
ATGAAGGCGCGAATGTTCACAACTCTGGCACTCGCTTTTGTCTGGTTGCCCGCAATGGGACAACCCAAAGTTCCCCAGAG
TGTATCCTATGGGAACGAAGGCTATCCTCAACGGGAGCAAGTCAATGTTCTGGCACAGCAGATAGTCAATGAGCTACTGC
TGACCAATGACGTACTTTCCTCCACCGATCCCATCGTGGTTGCGACACCGGTTAACGTGGATGACATGGTCCATAGTGGC
AGTTTCGCTCGCCAGCTACAGCAGGGAATGATGGCGGCGCTTCACGCCCGGTATTTTAACGTAGTGGATACCGCCATTAG
CCAAACCCTGAGAGTTACAGAGCAAGGGGACTTGTTGCTGAGCCGCGATTGGCAAAAGCTGCGGGACACTGCCCAGACCC
AGCATGTGCTGGTGGCCACTTACAGCCTGGGACGTGATGGCATGACAGTAAACAGTCGCCTGGTCGACATTGCCAATAAC
CGGGTGGTGGCAGCCTCACAATCGTTCAGTCGTCCGGGCGATCTCAGAGATTACCTGGGTTACTCTCAGCAAGTGGTCTC
CAAAGACGGGCTATTGTATCGCTATGAAGCGCCTGGATTGGACAGAGTCACTCTGCTTGGAGAAGACAAATGA

Upstream 100 bases:

>100_bases
AGTAAAGTAATTGCCACAGTTGCCGATAGTTGTGTAATGGATTGGAAAACCTGGTACTGGGTTCTCTTATTAACTTATAT
TAAATCATGGAGTTGACTCT

Downstream 100 bases:

>100_bases
AAAAGTGGATTTACACCTGTTTGGCGTTGGTGTTTTTAGCCGGTTGTGCAAGCAGTGATGACCGTTATGTACAGTGGGAA
ACAGAGGCGCCTGCCAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKARMFTTLALAFVWLPAMGQPKVPQSVSYGNEGYPQREQVNVLAQQIVNELLLTNDVLSSTDPIVVATPVNVDDMVHSG
SFARQLQQGMMAALHARYFNVVDTAISQTLRVTEQGDLLLSRDWQKLRDTAQTQHVLVATYSLGRDGMTVNSRLVDIANN
RVVAASQSFSRPGDLRDYLGYSQQVVSKDGLLYRYEAPGLDRVTLLGEDK

Sequences:

>Translated_210_residues
MKARMFTTLALAFVWLPAMGQPKVPQSVSYGNEGYPQREQVNVLAQQIVNELLLTNDVLSSTDPIVVATPVNVDDMVHSG
SFARQLQQGMMAALHARYFNVVDTAISQTLRVTEQGDLLLSRDWQKLRDTAQTQHVLVATYSLGRDGMTVNSRLVDIANN
RVVAASQSFSRPGDLRDYLGYSQQVVSKDGLLYRYEAPGLDRVTLLGEDK
>Mature_210_residues
MKARMFTTLALAFVWLPAMGQPKVPQSVSYGNEGYPQREQVNVLAQQIVNELLLTNDVLSSTDPIVVATPVNVDDMVHSG
SFARQLQQGMMAALHARYFNVVDTAISQTLRVTEQGDLLLSRDWQKLRDTAQTQHVLVATYSLGRDGMTVNSRLVDIANN
RVVAASQSFSRPGDLRDYLGYSQQVVSKDGLLYRYEAPGLDRVTLLGEDK

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23304; Mature: 23304

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARMFTTLALAFVWLPAMGQPKVPQSVSYGNEGYPQREQVNVLAQQIVNELLLTNDVLS
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
STDPIVVATPVNVDDMVHSGSFARQLQQGMMAALHARYFNVVDTAISQTLRVTEQGDLLL
CCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SRDWQKLRDTAQTQHVLVATYSLGRDGMTVNSRLVDIANNRVVAASQSFSRPGDLRDYLG
CCCHHHHHHHHHHCEEEEEEEECCCCCCEECCEEEEECCCEEEEECCCCCCCCCHHHHHC
YSQQVVSKDGLLYRYEAPGLDRVTLLGEDK
HHHHHHCCCCEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MKARMFTTLALAFVWLPAMGQPKVPQSVSYGNEGYPQREQVNVLAQQIVNELLLTNDVLS
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
STDPIVVATPVNVDDMVHSGSFARQLQQGMMAALHARYFNVVDTAISQTLRVTEQGDLLL
CCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SRDWQKLRDTAQTQHVLVATYSLGRDGMTVNSRLVDIANNRVVAASQSFSRPGDLRDYLG
CCCHHHHHHHHHHCEEEEEEEECCCCCCEECCEEEEECCCEEEEECCCCCCCCCHHHHHC
YSQQVVSKDGLLYRYEAPGLDRVTLLGEDK
HHHHHHCCCCEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA