| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is flgI
Identifier: 119775446
GI number: 119775446
Start: 2777392
End: 2778483
Strand: Reverse
Name: flgI
Synonym: Sama_2311
Alternate gene names: 119775446
Gene position: 2778483-2777392 (Counterclockwise)
Preceding gene: 119775447
Following gene: 119775445
Centisome position: 64.52
GC content: 53.94
Gene sequence:
>1092_bases ATGAAAATCAAGGTTCTGCTTGCCGTGGCCTTGCTGGCCATGACAGTGCCGGTTAAAGCCGAGCGCATTAAAGATATCGC CGCCGTTCAGGGTGTGCGCAGTAACCAATTGATTGGTTATGGATTGGTGGTGGGTTTGCCGGGCACGGGTGAAAAGGCAA ATTACACAGAGCAAACTTTTACCACCATGCTGAAAAACTTCGGCATTAATTTGCCGACCAACGTAAAGCCCAAGATTAAA AACGTGGCCGTAGTGGCAGTGCATGCCGATATGCCACCTTTCATCAAACCCGGCCAGACGCTGGATGTCACAGTGTCCAG CATAGGCGAGGCCAAGAGTCTGCGTGGTGGAACTCTGCTGCAAACCTTCCTTAAAGGGGTGGATGGCAACATCTACGCCA TTGCGCAGGGCAGCATGGTGGTGTCCGGTTTCAGTGCCGAAGGGCTTGATGGATCCAAGGTTATTCAGAATACCCCAACA GTGGGCCGTATCCCCAACGGCGCTCTGGTGGAACGGGCCGTGCCGTCTGCTTTTGCCCATGGAGACTTCCTTACCTTTAA CCTGCACCGAGCCGACTTCTCTACCGCCAAGCGGATGGCCGATGCCATTAACGATTTGTTGGGGCCGGAAATGGCTCGCG CACTCGATGCAGCCTCGGTTCAGGTGTATGCCCCACGGGATGCCTCACAGCGGGTGTCGTTTCTCGCGACACTGGAGAAC GTCGAAGTTGAGCCTGCGGATGAGTCGGCCAAGGTGATTGTCAACTCGCGCACCGGCACCATAGTCGTTGGTCAGAATGT GAAGTTATTACCAGCAGCTGTGACCCATGGTGGTCTGACAGTGACCATTGCTGAAAATCAGCAGGTGTCCCAACCCAATG CTCTTGCCGGTGGCGATACCGTGGTAACCAACCAAAGCACCATAGATGCGTCTCAGGCCAATAGCCGTATGTTCCTGTTT AATCCGGGAACCAGCTTGGATGAATTGGTCAGGGCCGTGAATTTGGTTGGTGCTGCACCTTCAGATGTGCTTGCGATCCT TGAGGCGTTAAAAATGGCAGGCGCCTTGCATGGTGAGCTTATCGTCATTTGA
Upstream 100 bases:
>100_bases TCAATACAGTGGCACTGGCACCTTTGCCAACTCGCAGCAGGTGGGCTGGCTCAGTCAGTTCTTCCTCAGCGATTGGTGGC CCTTTTAAAGGAGCTTGGAC
Downstream 100 bases:
>100_bases TTCTTGTCGGAAAATTGGCAACTCACCATGGAAAAGCTTTCAAACGCCTCACATTTCCTCGACATCGGTGGCCTGGACAA ATTAAGAGCCCAGGCCAAGG
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI
Sequences:
>Translated_363_residues MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI >Mature_363_residues MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=365, Percent_Identity=46.8493150684932, Blast_Score=295, Evalue=4e-81,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_SHEAM (A1S810)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928186.1 - STRING: A1S810 - GeneID: 4604561 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2311 - NMPDR: fig|326297.7.peg.2166 - eggNOG: COG1706 - HOGENOM: HBG321070 - OMA: PGTGEQS - PhylomeDB: A1S810 - ProtClustDB: PRK05303 - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 37970; Mature: 37970
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTF CEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH TTMLKNFGINLPTNVKPKIKNVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLL HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHCCCHHHCCCCHHH QTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPTVGRIPNGALVERAVPSAFAH HHHHHCCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCHHHCC GDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN CCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHC VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDT CEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE VVTNQSTIDASQANSRMFLFNPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGEL EEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE IVI EEC >Mature Secondary Structure MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTF CEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH TTMLKNFGINLPTNVKPKIKNVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLL HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHCCCHHHCCCCHHH QTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPTVGRIPNGALVERAVPSAFAH HHHHHCCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCHHHCC GDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN CCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHC VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDT CEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE VVTNQSTIDASQANSRMFLFNPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGEL EEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE IVI EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA