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The map label for this gene is flgH

Identifier: 119775447

GI number: 119775447

Start: 2778496

End: 2779170

Strand: Reverse

Name: flgH

Synonym: Sama_2312

Alternate gene names: 119775447

Gene position: 2779170-2778496 (Counterclockwise)

Preceding gene: 119775448

Following gene: 119775446

Centisome position: 64.54

GC content: 54.96

Gene sequence:

>675_bases
ATGCTCAGATACCTTATGGTTGGTTCGCTCTTGGTGCTCGCAGGATGTGCCAGTACCGAACACAAACCTATTCCGGACGA
TCCCTACTATGCCCCTGTGGTGCCTGAAGAGCCTCCGGTCGCATTGGAACCTACGGGCTCTATTTTCCTCGACTCACAGG
CGGCAAGTTTGTACACGGATATTCGCGCCCACAGGGTAGGGGACATCATTACCGTGGTGCTGACAGAGTCGACCCAGGCA
ACCAAGAGTGCCAACAACGAAATCAAAAAGGGTTCAGACCTCAACATGGATGCCATTCAGGCGCTCGGCGGCCCGGTCAC
CATCAGTGGTAATCCGCTGAGTCTGGGGTATTCCGACAGCATGAACACCAAGCGTGAGGCTGACGCCGATCAGAGCAACA
GTCTCAGGGGCAATATCTCTGCCCATGTGCTTCAGGTGCTGGCCAATGGCAACCTGGTTATTCGCGGAGAAAAGTGGATA
AGCATCAACAACGGTGACGAGTTTATTCGGGTCACCGGGGTTATCCGCCCTCAGGACATCACCACCGACAACACGGTTGT
ATCTACCCGGGTCGCCAATGCGCGAATTCAATACAGTGGCACTGGCACCTTTGCCAACTCGCAGCAGGTGGGCTGGCTCA
GTCAGTTCTTCCTCAGCGATTGGTGGCCCTTTTAA

Upstream 100 bases:

>100_bases
CATCGAAAGTCAGCGCATCTATGAAATGAACTCCAAGGTGATTTCAGCAGTGGATCAGATGCTGGCCTACGTTAACCAGA
ATCTGTAAGAGGCGATGGTT

Downstream 100 bases:

>100_bases
AGGAGCTTGGACATGAAAATCAAGGTTCTGCTTGCCGTGGCCTTGCTGGCCATGACAGTGCCGGTTAAAGCCGAGCGCAT
TAAAGATATCGCCGCCGTTC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLRYLMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTDIRAHRVGDIITVVLTESTQA
TKSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDSMNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWI
SINNGDEFIRVTGVIRPQDITTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF

Sequences:

>Translated_224_residues
MLRYLMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTDIRAHRVGDIITVVLTESTQA
TKSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDSMNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWI
SINNGDEFIRVTGVIRPQDITTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF
>Mature_224_residues
MLRYLMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTDIRAHRVGDIITVVLTESTQA
TKSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDSMNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWI
SINNGDEFIRVTGVIRPQDITTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=230, Percent_Identity=38.695652173913, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_SHEAM (A1S811)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928187.1
- STRING:   A1S811
- GeneID:   4604562
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2312
- NMPDR:   fig|326297.7.peg.2167
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   DPIYAGG
- PhylomeDB:   A1S811
- ProtClustDB:   PRK12698
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 24253; Mature: 24253

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYLMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHH
IRAHRVGDIITVVLTESTQATKSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDS
HHHHHCCCEEEEEEECCCHHHHHCCCHHCCCCCCCHHHHHHCCCCEEECCCEEEECCCCC
MNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWISINNGDEFIRVTGVIRPQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCEEEEEEEECCCCC
TTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF
CCCCEEEEEEEECEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRYLMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHH
IRAHRVGDIITVVLTESTQATKSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDS
HHHHHCCCEEEEEEECCCHHHHHCCCHHCCCCCCCHHHHHHCCCCEEECCCEEEECCCCC
MNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWISINNGDEFIRVTGVIRPQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCEEEEECCCCCEEEEEEEECCCCC
TTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF
CCCCEEEEEEEECEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA