Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is flgL [H]

Identifier: 119775443

GI number: 119775443

Start: 2773090

End: 2774295

Strand: Reverse

Name: flgL [H]

Synonym: Sama_2308

Alternate gene names: 119775443

Gene position: 2774295-2773090 (Counterclockwise)

Preceding gene: 119775444

Following gene: 119775442

Centisome position: 64.43

GC content: 51.16

Gene sequence:

>1206_bases
ATGCGTATTTCTACCTCGCAAATGTTTACCCAGAACACCAATAACATACTGCAAAAGCAGACAGAGACCGCGAAGCTGCT
CGAACAGCTGTCCAGTGGCAAGAAGGTGAATACCTCGGGTGACGACCCTGTGGCGGCCTTGGGTATCGACAATCTCAACC
AGCAGCAGGCGCTGGTGGATCAATTTCTGAAGAACATCGACTACGCCAAAAATCATTTAGGCATTGCCGAGAGTAAGCTT
GGCAGCGCCGAGGAGTTGGTTACCGGTTTACGAGAACAAATTCTGCGCGGGGTAAATGGTGGCCTTTCGCCCTCCGAGCG
GCAAATGATTGCCGATGAGATGCGTGGCAGCCTGCAGGAATTGCTGAATGTGGCAAACACCCGGGATGAGTCCGGCAACT
TTATGTTCTCCGGTTTTAAAACAGACACAGAACCCTTTGCCTTCGACGGTGCCGGCAACATGGTTTATAGCGGTGATGCC
GGCGTGCGTGACGCCATGATTTCCCGTGGCATCGCCATGGGCACCAATGTGCCCGGCGATATGGCGTTTATGACGTCGCC
CAACGCACTTGGCGATTATACCGTCAATTATTTGTCGAGCCAGGCAGGTGATTTTAAGGTTCAAAGCGCTGCGATAACCA
ACCCAGCAGCTCATGTGGAAGACACTTATACCTTTAATTTTATTGATAATGGTTCAGGCGGCGTAAACCTGGAAGTGCGT
GACAGTGCCAATGGGCTGGTCACCACAGTGAACAACTTTGATGCCACCAATCCTGTTAGTTTCAACGGAATAGACGTCAA
GCTGGAAGGCACACCAGCCGCTGGCGACAGTATTTCCCTGGCTCCTCAGGCTGAAGTCAGCATTTTCGACACCATTAATA
AGGCTATCGCCCTGATAGAAGACGATAGTCGCATGAATTCTCCCGCTGGTATCGCAGAGTTGGCACAGCTCTTGAATGAC
ACTGACAGCGGATTGAATCAGCTCAGCACCGCCAGAAGCGTGGCAGGTAATAACCTCAAGAGTCTTGAGAGTTACGCCGG
ACGACACGCAGAAGAGCAGGTCGTCAATACCTCGGCGCTGTCATTGCTGGAAGATCTGGATTACGCAACGGCGATTACGG
AATTTGAAAAGCAGCAGCTTGCATTGAACGCAGTCTCCAATGTGTTTAGCAGAGTTGGTTCTGTGTCTTTGTTCGACTAC
TTGTAG

Upstream 100 bases:

>100_bases
CAGGTTCCAACAGTCATACCAGGCGTCGGCACGCATTATGACCACGGCCCAGCAAATCTTTGACACCCTGTTTGCGTCGG
TGCGTTAAGAGGATTGAGTG

Downstream 100 bases:

>100_bases
CGACAGGCACAGCCACTCACTGGAAGCAATTTTGTTAACTAATTTAGCCAAGCTCCAAGCCTTGGCGGTAACACTAGGAA
GAGGAACTCAACATGGCTAT

Product: flagellar hook-associated protein FlgL

Products: NA

Alternate protein names: HAP3; Hook-filament junction protein [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MRISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVDQFLKNIDYAKNHLGIAESKL
GSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQELLNVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDA
GVRDAMISRGIAMGTNVPGDMAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVR
DSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIEDDSRMNSPAGIAELAQLLND
TDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSALSLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDY
L

Sequences:

>Translated_401_residues
MRISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVDQFLKNIDYAKNHLGIAESKL
GSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQELLNVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDA
GVRDAMISRGIAMGTNVPGDMAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVR
DSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIEDDSRMNSPAGIAELAQLLND
TDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSALSLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDY
L
>Mature_401_residues
MRISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVDQFLKNIDYAKNHLGIAESKL
GSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQELLNVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDA
GVRDAMISRGIAMGTNVPGDMAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVR
DSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIEDDSRMNSPAGIAELAQLLND
TDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSALSLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDY
L

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1787324, Length=257, Percent_Identity=29.5719844357977, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013384
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 42771; Mature: 42771

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVD
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHHHHH
QFLKNIDYAKNHLGIAESKLGSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQE
HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDAGVRDAMISRGIAMGTNVPGD
HHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC
MAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVR
EEEEECCCCCCHHHHHHHHCCCCCEEEEHHEECCCHHHCCCCEEEEEEECCCCCEEEEEE
DSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIE
CCCCCEEEEECCCCCCCCCEECCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHEEEE
DDSRMNSPAGIAELAQLLNDTDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSAL
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
SLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MRISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVD
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHHHHH
QFLKNIDYAKNHLGIAESKLGSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQE
HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDAGVRDAMISRGIAMGTNVPGD
HHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC
MAFMTSPNALGDYTVNYLSSQAGDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVR
EEEEECCCCCCHHHHHHHHCCCCCEEEEHHEECCCHHHCCCCEEEEEEECCCCCEEEEEE
DSANGLVTTVNNFDATNPVSFNGIDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIE
CCCCCEEEEECCCCCCCCCEECCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHEEEE
DDSRMNSPAGIAELAQLLNDTDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSAL
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
SLLEDLDYATAITEFEKQQLALNAVSNVFSRVGSVSLFDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8158647; 8905232; 9278503; 1447789 [H]