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The map label for this gene is fliC [H]

Identifier: 119775442

GI number: 119775442

Start: 2772176

End: 2772997

Strand: Reverse

Name: fliC [H]

Synonym: Sama_2307

Alternate gene names: 119775442

Gene position: 2772997-2772176 (Counterclockwise)

Preceding gene: 119775443

Following gene: 119775441

Centisome position: 64.4

GC content: 51.58

Gene sequence:

>822_bases
ATGGCTATTACTGTTAATACCAATGTGACCTCCATGAAGGCCCAAAAGAACCTGAACATGTCCAGTGGTCAGTTGGCGAC
TTCCATGGAGCGTCTGTCATCCGGTTTGCGCATCAACAGCGCGAAAGACGACGCCGCTGGTCTGGCAATTTCTAACCGTC
TGAACAGCCAGGTGCGCGGACTTGAAGTGGGCATGCGTAATGCCAACGATGGTATTTCCATTGCCCAGATTGCTGAAGGT
GCGATGCAAGAGCAAACCAACATGCTCCAGCGTATGCGTGACCTGTCAATCCAGGCCGAAAACGGTGCCAACAGTGCCGA
TGACCTGCAGGCGATTCAGGATGAAATCACTCAGCTGATCACCGAGATTACCGCTATTGGTAACTCCACCGCCTTTGGTA
ACACCAAGCTGATGACCGGTGATTTCTCCGCTGGCAAAAAGTTCCAGGTGGGGCACCAGGAAGGTGAGGACGTTACTATC
ACTGTAAACACAAACAATGCCACTTCATTGTCAGTGAATGCTGTAACTGTACTTACTTCTGCTGGTCGTAACTCTTCATT
GCTGAAGATTGATAATGCAATCAAGAAAATCGATACACAGCGCGCCGCTCTCGGTGCGGTACAAAACCGTCTGGCTCACA
ATATCAGCAACAGCGCTAACACCCAGGCCAACGTTGCCGATGCCAAGAGCCGTATCGTGGATGTGGATTTCGCCAAAGAA
ACCTCTGCCATGACCAAAAATCAGGTACTGCAGCAGACTGGCTCTGCCATGCTGGCGCAAGCCAACCAATTGCCCCAGGT
TGCCTTGTCCCTGCTCGGCTGA

Upstream 100 bases:

>100_bases
ACTTGTAGCGACAGGCACAGCCACTCACTGGAAGCAATTTTGTTAACTAATTTAGCCAAGCTCCAAGCCTTGGCGGTAAC
ACTAGGAAGAGGAACTCAAC

Downstream 100 bases:

>100_bases
TATTTGACGGGCATCAGTACGCGGCGATGCCTGCCAGGCGGCAACTTTTTGCCACTGGCCAGGCTAGCCGCTCTGTTTTT
TTATAAAGCAAATATTTGAG

Product: flagellin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDGISIAQIAEG
AMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLITEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTI
TVNTNNATSLSVNAVTVLTSAGRNSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
TSAMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Sequences:

>Translated_273_residues
MAITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDGISIAQIAEG
AMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLITEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTI
TVNTNNATSLSVNAVTVLTSAGRNSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
TSAMTKNQVLQQTGSAMLAQANQLPQVALSLLG
>Mature_272_residues
AITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDGISIAQIAEGA
MQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLITEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTIT
VNTNNATSLSVNAVTVLTSAGRNSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKET
SAMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=177, Percent_Identity=46.3276836158192, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28806; Mature: 28675

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
CEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LEVGMRNANDGISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
TEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTS
HHHHHCCCCCCCCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEEE
AGRNSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEHHHH
TSAMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
EEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LEVGMRNANDGISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
TEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTS
HHHHHCCCCCCCCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEEE
AGRNSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEHHHH
TSAMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]