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The map label for this gene is fliM [H]

Identifier: 119775425

GI number: 119775425

Start: 2754749

End: 2755777

Strand: Reverse

Name: fliM [H]

Synonym: Sama_2290

Alternate gene names: 119775425

Gene position: 2755777-2754749 (Counterclockwise)

Preceding gene: 119775426

Following gene: 119775424

Centisome position: 64.0

GC content: 51.41

Gene sequence:

>1029_bases
GTGACGGATTTACTTAGCCAAGACGAAATTGATGCGCTCCTTCACGGCGTGGATGATGTTGAAGAAGAAGAGGTCAGCGA
GGCCGGTGCGTCGGCGCGCTCCTACGACTTCTCTTCACAGGACAGAATCGTTCGTGGCCGGATGCCAACGCTGGAAATCG
TTAACGAGCGATTTGCCCGCCATTTGCGCATAAGCATGTTCAATATGATGCGCCGCGCCGCTGAGGTGTCCATTAACGGC
GTGCAGATGCTCAAGTTTGGCGAATACGTTCATACCCTGTTTGTACCAACCAGCCTGAATATGGTGCGGTTTCAACCCCT
GAAAGGCACCGCACTTATCACCATGGAAGCCCGCTTGGTGTTTATTTTGGTGGACAACTTTTTTGGTGGCGATGGCCGTT
TCCACGCCAAAATTGAAGGTCGTGAATTTACCCCGACAGAGCGGCGCATCGTGCAGCTGCTGCTGAAAATCATCTTCGAA
GATTATAAAGACGCCTGGGCGCCGGTGATGGATGTTGAGTTTGATTATCTCGACTCAGAAGTGAACCCGGCCATGGCGAA
TATCGTCAGTCCTACAGAAGTAGTGGTGGTGAACTCCTTCCATATTGAGGTGGACGGCGGTGGCGGTGATTTCCACATCA
CCATGCCTTACTCCATGATTGAACCTATCCGTGAACTGCTGGATGCGGGTGTCCAGAGCGATAAGCAGGATACCGACATG
CGCTGGTCTCAGGCGCTTAAGGATGAAATCATGGATGTCGAAGTGGGCTTTGAAGCCACAGTGGTTGAACACCAGATAAG
CCTGAGGGACGTCATGGAGATGCAGGCAGGCGATGTGATCCCGGTCGAGCTCCCTGAATATGTTTTGATGAAGATTGAAG
AGCTGCCCACTTACCGCTGCAAGCTGGGTAAATCCCGTGAACAGTTGGCGCTCAAAATATGTGAAAAGATCCCTCGTCCA
GAGACTGTGAAAACCGAATTACAATTGGTGACCCGAAAGGGCAAAGCCAGAGATATCAATGACCTCTAA

Upstream 100 bases:

>100_bases
AACCCGTTACCGGTCGCAAAGTGGTTGAAAAGGTCCTCTTTACCGGTTTTGTGATGCAATAACACAGGTGTTATTGCTAT
CAAATGAATAAGGCAAGATT

Downstream 100 bases:

>100_bases
GGTGATATGAGATGAATACCGAAGACGATTGGGCCGCAGCAATGGCCGAGCAGGCCCTGGAAGAAGCCAAGGCCGCCGAG
TTTGAAGAGCTGAAAGATGA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTDLLSQDEIDALLHGVDDVEEEEVSEAGASARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRCKLGKSREQLALKICEKIPRP
ETVKTELQLVTRKGKARDINDL

Sequences:

>Translated_342_residues
MTDLLSQDEIDALLHGVDDVEEEEVSEAGASARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRCKLGKSREQLALKICEKIPRP
ETVKTELQLVTRKGKARDINDL
>Mature_341_residues
TDLLSQDEIDALLHGVDDVEEEEVSEAGASARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSINGV
QMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFED
YKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDMR
WSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRCKLGKSREQLALKICEKIPRPE
TVKTELQLVTRKGKARDINDL

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=313, Percent_Identity=38.6581469648562, Blast_Score=260, Evalue=1e-70,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38978; Mature: 38847

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLSQDEIDALLHGVDDVEEEEVSEAGASARSYDFSSQDRIVRGRMPTLEIVNERFAR
CCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
HLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCEEEEECCCCEEEEEEECEEE
FILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSE
EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCC
VNPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
CCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHH
RWSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRC
HHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCHHH
KLGKSREQLALKICEKIPRPETVKTELQLVTRKGKARDINDL
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDLLSQDEIDALLHGVDDVEEEEVSEAGASARSYDFSSQDRIVRGRMPTLEIVNERFAR
CCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
HLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCEEEEECCCCEEEEEEECEEE
FILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSE
EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCC
VNPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
CCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHH
RWSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRC
HHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCHHH
KLGKSREQLALKICEKIPRPETVKTELQLVTRKGKARDINDL
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]