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The map label for this gene is fliN [H]

Identifier: 119775424

GI number: 119775424

Start: 2754363

End: 2754737

Strand: Reverse

Name: fliN [H]

Synonym: Sama_2289

Alternate gene names: 119775424

Gene position: 2754737-2754363 (Counterclockwise)

Preceding gene: 119775425

Following gene: 119775423

Centisome position: 63.97

GC content: 54.13

Gene sequence:

>375_bases
ATGAATACCGAAGACGATTGGGCCGCAGCAATGGCCGAGCAGGCCCTGGAAGAAGCCAAGGCCGCCGAGTTTGAAGAGCT
GAAAGATGAGACCAAACCCCTGAGCAGTGAGGAGGCCGCCAAGCTGGATGCCATTTTGGACATTCCAGTGACCATTTCTA
TGGAAGTGGGGCGCAGCTATATCAGCATCCGCAACCTGTTGCAGCTCAATCAGGGCTCAGTGGTGGAGCTCGACCGCGTG
GCCGGTGAGCCGCTGGATGTGATGGTTAACGGTACTCTGATAGCCCACGGCGAAGTGGTGGTGGTAAACGACAAGTTTGG
TATTCGCCTCACTGACGTGATAAGTCAAACCGAGCGAATTAAAAAGCTCAAGTAA

Upstream 100 bases:

>100_bases
GTGAAAAGATCCCTCGTCCAGAGACTGTGAAAACCGAATTACAATTGGTGACCCGAAAGGGCAAAGCCAGAGATATCAAT
GACCTCTAAGGTGATATGAG

Downstream 100 bases:

>100_bases
AACAATAGGGAGCCTGTGTGTCTTTAACTCTACTCTCACTGGCATCCACAGGTTCTGCCGGCACAGATGTCGCCGGCTCT
GCGGGTTATGCCACCACACT

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNTEDDWAAAMAEQALEEAKAAEFEELKDETKPLSSEEAAKLDAILDIPVTISMEVGRSYISIRNLLQLNQGSVVELDRV
AGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Sequences:

>Translated_124_residues
MNTEDDWAAAMAEQALEEAKAAEFEELKDETKPLSSEEAAKLDAILDIPVTISMEVGRSYISIRNLLQLNQGSVVELDRV
AGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK
>Mature_124_residues
MNTEDDWAAAMAEQALEEAKAAEFEELKDETKPLSSEEAAKLDAILDIPVTISMEVGRSYISIRNLLQLNQGSVVELDRV
AGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=120, Percent_Identity=46.6666666666667, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13639; Mature: 13639

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEDDWAAAMAEQALEEAKAAEFEELKDETKPLSSEEAAKLDAILDIPVTISMEVGRSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCEEEEHHHCHHH
ISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERI
HHHHHHHHCCCCCEEEEHHHCCCCEEEEECCEEEECCEEEEEECCCCEEHHHHHHHHHHH
KKLK
HCCC
>Mature Secondary Structure
MNTEDDWAAAMAEQALEEAKAAEFEELKDETKPLSSEEAAKLDAILDIPVTISMEVGRSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCEEEEHHHCHHH
ISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERI
HHHHHHHHCCCCCEEEEHHHCCCCEEEEECCEEEECCEEEEEECCCCEEHHHHHHHHHHH
KKLK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622217; 10984043 [H]