| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheW [H]
Identifier: 119775407
GI number: 119775407
Start: 2738406
End: 2738900
Strand: Reverse
Name: cheW [H]
Synonym: Sama_2272
Alternate gene names: 119775407
Gene position: 2738900-2738406 (Counterclockwise)
Preceding gene: 119775408
Following gene: 119775406
Centisome position: 63.6
GC content: 49.7
Gene sequence:
>495_bases ATGACAGACTCGAGAAATGTAGCGGCAGTGGCTGCCGGAAAGGATGATGCGGTATTACAGTGGGTGACCTTCAGACTGGA TAACGAAACCTATGGCATCAATGTGATGCAGGTTCAGGAGGTGCTGCGTTATACCGAGATTGCCCCTGTACCGGGAGCCC CTCACTACGTTTTGGGTATTATCAACCTGCGTGGCAACGTGGTGACGGTTATCGACACCCGTTCACGTTTTGGGCTGCAG CCTGCTGAAGTCGATGACTCTACCCGAATTGTGATCATCGAAGCTGAAAAACAGGTCATCGGGATTTTGGTCGACAGTGT GGCAGAAGTGGTTTATCTGCGCCGCTCTGAAATTGACAATGCGCCAAATGTGGGTACCGAAGAGAGTGCCAAGTTTATTC AGGGCGTGAGTAACAGGGATAATGAGCTGCTGATTCTGGTTGATTTGGACAAATTGCTGTCTGATGAAGAATGGGCAGAG CTTGCTCAGATTTAA
Upstream 100 bases:
>100_bases GTAGTGAAAGAACAAATGTGTGGCATCTTGAATGTCAGGGCATTGATCCAAATGCTCAATGCAGGTTTAGGTTGTCAGGA TCCTATTAGCTGAGGTACGT
Downstream 100 bases:
>100_bases TGAGATACCAAGCCACAGGCCGCCAATGGCGGCCTGTGGCGTATCTGACTCAGGGAGTGGTATTGCTGCATGGTTGAAAA TGGGTTTCTAATCGCAGCCT
Product: purine-binding chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTDSRNVAAVAAGKDDAVLQWVTFRLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLQ PAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAE LAQI
Sequences:
>Translated_164_residues MTDSRNVAAVAAGKDDAVLQWVTFRLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLQ PAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAE LAQI >Mature_163_residues TDSRNVAAVAAGKDDAVLQWVTFRLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLQP AEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAEL AQI
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=161, Percent_Identity=31.6770186335404, Blast_Score=100, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18149; Mature: 18018
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSRNVAAVAAGKDDAVLQWVTFRLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGI CCCCCCEEEEECCCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEE INLRGNVVTVIDTRSRFGLQPAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDN EECCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC APNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAELAQI CCCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHCC >Mature Secondary Structure TDSRNVAAVAAGKDDAVLQWVTFRLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGI CCCCCEEEEECCCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEE INLRGNVVTVIDTRSRFGLQPAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDN EECCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC APNVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEEWAELAQI CCCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]