Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775406

Identifier: 119775406

GI number: 119775406

Start: 2737932

End: 2738336

Strand: Reverse

Name: 119775406

Synonym: Sama_2271

Alternate gene names: NA

Gene position: 2738336-2737932 (Counterclockwise)

Preceding gene: 119775407

Following gene: 119775403

Centisome position: 63.59

GC content: 55.56

Gene sequence:

>405_bases
ATGGTTGAAAATGGGTTTCTAATCGCAGCCTTGGTGTACGTTGTCGCGTGTTTGGCGCTGGTGCTATACCTGCAAAAGCA
GCTCGGGAAGCTTCGCACCAAGGTGGATGCGCTGTCGTTGCTGCTTAAAGAGGCCGATAAGCAGCGTGAGGGTTTCAAGC
GGGAATTGCATGAGCTCAGAAGTGGCACCATAGGCGTGGGTAAGCGGGTGCTCGAGTTGGAAAAGCGCTTGGTGGCACAG
GATGCTAGAATCGATGAAACCCGCGAGCAAGACCCACAGGCCAGGCTTTATACCCGGGCGATGAAAATGGTCTCGCTCGG
TGCCGGTATTGAAGAGCTGATGCATGAGTGCGAGCTGCCAAGGGCCGAAGCAGAGTTGTTGCTGCGTCTTCACCGCAAGG
GGTAG

Upstream 100 bases:

>100_bases
TGAAGAATGGGCAGAGCTTGCTCAGATTTAATGAGATACCAAGCCACAGGCCGCCAATGGCGGCCTGTGGCGTATCTGAC
TCAGGGAGTGGTATTGCTGC

Downstream 100 bases:

>100_bases
TCAGTCGCTGTTGCGAATCCTTGAGATGGGTTTTAAGACAGGACGATAGCAACTATCACCCTGTCTTTGATGTAGTAGAA
AAAAAGCTGCCGTCGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVENGFLIAALVYVVACLALVLYLQKQLGKLRTKVDALSLLLKEADKQREGFKRELHELRSGTIGVGKRVLELEKRLVAQ
DARIDETREQDPQARLYTRAMKMVSLGAGIEELMHECELPRAEAELLLRLHRKG

Sequences:

>Translated_134_residues
MVENGFLIAALVYVVACLALVLYLQKQLGKLRTKVDALSLLLKEADKQREGFKRELHELRSGTIGVGKRVLELEKRLVAQ
DARIDETREQDPQARLYTRAMKMVSLGAGIEELMHECELPRAEAELLLRLHRKG
>Mature_134_residues
MVENGFLIAALVYVVACLALVLYLQKQLGKLRTKVDALSLLLKEADKQREGFKRELHELRSGTIGVGKRVLELEKRLVAQ
DARIDETREQDPQARLYTRAMKMVSLGAGIEELMHECELPRAEAELLLRLHRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15222; Mature: 15222

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVENGFLIAALVYVVACLALVLYLQKQLGKLRTKVDALSLLLKEADKQREGFKRELHELR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTIGVGKRVLELEKRLVAQDARIDETREQDPQARLYTRAMKMVSLGAGIEELMHECELP
CCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
RAEAELLLRLHRKG
HHHHHHHHHHHHCC
>Mature Secondary Structure
MVENGFLIAALVYVVACLALVLYLQKQLGKLRTKVDALSLLLKEADKQREGFKRELHELR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTIGVGKRVLELEKRLVAQDARIDETREQDPQARLYTRAMKMVSLGAGIEELMHECELP
CCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
RAEAELLLRLHRKG
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA