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The map label for this gene is 119775397

Identifier: 119775397

GI number: 119775397

Start: 2725839

End: 2726822

Strand: Reverse

Name: 119775397

Synonym: Sama_2262

Alternate gene names: NA

Gene position: 2726822-2725839 (Counterclockwise)

Preceding gene: 119775398

Following gene: 119775396

Centisome position: 63.32

GC content: 45.73

Gene sequence:

>984_bases
ATGACTACACAAATCACTCAAAACCCACATACTTCTAAATCAAACGTCGATGCCCAATTCCCGCAAATGGCGCGGGAAGA
AGAAATCGATTTAAGAGAACTTTTTGCTGTCATCAGGCAAGGCAAATGGCTAATCTTCGCCATTACCGCCGTATTTGCCA
TTGGCTCGGTGATTTTTGCCATCATGCAGCCAAATATCTACAAAGCTGAAGCATTATTGGCACCAGCTGAAGCAGATGGC
AGTAGCGGTGGTCTTGCTGCACTGGCATCCCAGTTTGGCGGCCTCGCCAGTATGGCGGGCATTAATTTGGGCGGTGGCGG
CGGAACAGATAAAACCCAACTTGCCATTGAAGTGTTAAAATCGCGCCAATTTGTGGGTGAATTTATTGAAAAACACCAAA
TACTGCCTGAGCTGATGGCGGTGAAGAAATGGCACATGGCAGAAAACAACCTAAGCTTCGATCCAGAGCTTTATAACAGC
GACACCAAAACGTGGATCCGCGAGGTTAAACCTCCATTTAAGCCCGAACCGTCAGTGCTCGAAGCACACAAAGAGTTTTT
AAAAATCCTGGCTGTTAGCAAAGACAAAGAAAGCGGGATGGTTAAGCTTTCGGTGGAGCACCAATCGCCTCTTGTTGCCA
AACAGTGGGTAGACTGGCTGGTAGCTGACATTAACCGCGTGATGAAAGAGCGTGATGTGTTAGAGGCCATGCGAAGCATA
GAGTTTTTGAATAAACAAATAGAACAAACAAACGTAGCCGATATCCGCGCTATTTTATACAAACTGGTGGAAGAGCAGGC
TAAAACCATCATGTTTGCTGAAGTGCGTGATGAATATGTTTTTAAAACCCTGGACCCGGCATTGGTACCTGAAGAAAAGG
CTAAGCCAAAACGAGCTTTGATTTGTGCACTGGGAACAGTGCTGGGCGGTATGTTTGGAATGATGTTGGTGATGGTAAGG
AGTTTTTCTAGAAAAGAAAGTTAG

Upstream 100 bases:

>100_bases
GAACCTAGAACCTAGAACCTAGAACCTAGAACCTAGAACCTTCTTTAAATATCTTTAAGCTTTCCTAGGGCCTAGTACCT
AGCATCTAAAACCTAAAAAT

Downstream 100 bases:

>100_bases
TGGCAATTTTTAGGGCCTATCGGTAACGTTCTCGATGAACAAAGAAAATCTAGTTTCTCACGGAATAACAATCGCACAAA
CATCGCAAAATGAACCAAAA

Product: chain length determinant protein

Products: NA

Alternate protein names: Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis; Chain Length Determinant Family Protein; OtnB Protein; O-Antigen Length Determinant Protein

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTTQITQNPHTSKSNVDAQFPQMAREEEIDLRELFAVIRQGKWLIFAITAVFAIGSVIFAIMQPNIYKAEALLAPAEADG
SSGGLAALASQFGGLASMAGINLGGGGGTDKTQLAIEVLKSRQFVGEFIEKHQILPELMAVKKWHMAENNLSFDPELYNS
DTKTWIREVKPPFKPEPSVLEAHKEFLKILAVSKDKESGMVKLSVEHQSPLVAKQWVDWLVADINRVMKERDVLEAMRSI
EFLNKQIEQTNVADIRAILYKLVEEQAKTIMFAEVRDEYVFKTLDPALVPEEKAKPKRALICALGTVLGGMFGMMLVMVR
SFSRKES

Sequences:

>Translated_327_residues
MTTQITQNPHTSKSNVDAQFPQMAREEEIDLRELFAVIRQGKWLIFAITAVFAIGSVIFAIMQPNIYKAEALLAPAEADG
SSGGLAALASQFGGLASMAGINLGGGGGTDKTQLAIEVLKSRQFVGEFIEKHQILPELMAVKKWHMAENNLSFDPELYNS
DTKTWIREVKPPFKPEPSVLEAHKEFLKILAVSKDKESGMVKLSVEHQSPLVAKQWVDWLVADINRVMKERDVLEAMRSI
EFLNKQIEQTNVADIRAILYKLVEEQAKTIMFAEVRDEYVFKTLDPALVPEEKAKPKRALICALGTVLGGMFGMMLVMVR
SFSRKES
>Mature_326_residues
TTQITQNPHTSKSNVDAQFPQMAREEEIDLRELFAVIRQGKWLIFAITAVFAIGSVIFAIMQPNIYKAEALLAPAEADGS
SGGLAALASQFGGLASMAGINLGGGGGTDKTQLAIEVLKSRQFVGEFIEKHQILPELMAVKKWHMAENNLSFDPELYNSD
TKTWIREVKPPFKPEPSVLEAHKEFLKILAVSKDKESGMVKLSVEHQSPLVAKQWVDWLVADINRVMKERDVLEAMRSIE
FLNKQIEQTNVADIRAILYKLVEEQAKTIMFAEVRDEYVFKTLDPALVPEEKAKPKRALICALGTVLGGMFGMMLVMVRS
FSRKES

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36483; Mature: 36352

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQITQNPHTSKSNVDAQFPQMAREEEIDLRELFAVIRQGKWLIFAITAVFAIGSVIFA
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IMQPNIYKAEALLAPAEADGSSGGLAALASQFGGLASMAGINLGGGGGTDKTQLAIEVLK
HHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH
SRQFVGEFIEKHQILPELMAVKKWHMAENNLSFDPELYNSDTKTWIREVKPPFKPEPSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHH
EAHKEFLKILAVSKDKESGMVKLSVEHQSPLVAKQWVDWLVADINRVMKERDVLEAMRSI
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLNKQIEQTNVADIRAILYKLVEEQAKTIMFAEVRDEYVFKTLDPALVPEEKAKPKRAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHH
ICALGTVLGGMFGMMLVMVRSFSRKES
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTQITQNPHTSKSNVDAQFPQMAREEEIDLRELFAVIRQGKWLIFAITAVFAIGSVIFA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IMQPNIYKAEALLAPAEADGSSGGLAALASQFGGLASMAGINLGGGGGTDKTQLAIEVLK
HHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH
SRQFVGEFIEKHQILPELMAVKKWHMAENNLSFDPELYNSDTKTWIREVKPPFKPEPSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHH
EAHKEFLKILAVSKDKESGMVKLSVEHQSPLVAKQWVDWLVADINRVMKERDVLEAMRSI
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLNKQIEQTNVADIRAILYKLVEEQAKTIMFAEVRDEYVFKTLDPALVPEEKAKPKRAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHH
ICALGTVLGGMFGMMLVMVRSFSRKES
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA